Evidence map›Paper›PMID 37658353›Full record

ArticleBMC genomics2023

Genome-wide association study of abnormal elevation of ALT in patients exposed to atabecestat.

Qingqin S Li, Stephan Francke, Jan Snoeys, John Thipphawong, Gary Romano, Gerald P Novak

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it, 5 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Qingqin S LiNeuroscience, Janssen Research & Development, LLC, Titusville, NJ, 08560, USA. qli2@its.jnj.com.
Stephan FranckeComputational Science Translational Platforms, Janssen Research & Development, LLC, Spring House, PA, 19477, USA.
Jan SnoeysTranslational Pharmacokinetics Pharmacodynamics and Investigative Toxicology, Janssen Research & Development, Beerse, Belgium.
John ThipphawongNeuroscience, Janssen Research & Development, LLC, Titusville, NJ, 08560, USA.
Gary RomanoNeuroscience, Janssen Research & Development, LLC, Titusville, NJ, 08560, USA.
Gerald P NovakNeuroscience, Janssen Research & Development, LLC, Titusville, NJ, 08560, USA.
Janssen (United States) · USJanssen (Belgium) · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAtabecestat, a potent brain penetrable BACE1 inhibitor that reduces CSF amyloid beta (Aβ), was developed as an oral treatment for Alzheimer's disease (AD). Elevated liver enzyme adverse events were reported in three studies although only one case met Hy's law criteria to predict serious hepatotoxicity.

methodWe performed a case-control genome-wide association study (GWAS) to identify genetic risk variants associated with liver enzyme elevation using 42 cases with alanine transaminase (ALT) above three times the upper limit of normal (ULN) and 141 controls below ULN. Additionally, we performed a GWAS using continuous maximal ALT/ULN (expressed as times the ULN) upon exposure to atabecestat as the outcome measure (n = 285).

resultsNo variant passed the genome-wide significance threshold (p = 5 × 10

conclusionThe suggestive GWAS signals in the case-control GWAS analysis suggest the potential role of inflammation in atabecestat-induced liver enzyme elevation.

Indexed as

Amyloid Precursor Protein SecretasesGenome-Wide Association StudyAlanine TransaminaseAmyloid beta-PeptidesAspartic Acid EndopeptidasesCarrier ProteinsHumansMitochondrial ProteinsPyridinesThiazinesAlanine TransaminaseAmyloid beta-PeptidesAmyloid Precursor Protein SecretasesAspartic Acid EndopeptidasesatabecestatC1QBP protein, humanCarrier ProteinsMitochondrial ProteinsPyridinesThiazinesALT elevationAtabecestatGWAS

Identifiers

PMID37658353
PMCPMC10472559
OpenAlexW4386378915

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.