Evidence map›Paper›PMID 37656460›Full record

ArticleJAMA network open2023

Genomic Sequencing as a First-Tier Screening Test and Outcomes of Newborn Screening.

Ting Chen, Chunna Fan, Yonglan Huang, Jizhen Feng, Yinhong Zhang, Jingkun Miao, Xiaohua Wang, Yulin Li, Cidan Huang, Weiwei Jin and 18 more

Open access · goldAbstract read
In one paragraph

Article in JAMA network open, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed, 1 pooled it
24.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 1 synthesis or guideline pooled it, 77 citations in OpenAlex.

  1. Pooled it
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  6. Progress and Prospects of Newborn Screening in China.International journal of neonatal screening · 2026
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10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

28 authors at 10 institutions in 1 country.

Ting ChenDepartment of Pediatric Endocrinology and Genetic Metabolism, Shanghai Institute for Pediatric Research & Center for Clinical Innovation and Research, Xinhua Hospital, Shanghai Jiaotong University School of Medicine, Shanghai, China.
Chunna FanBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Yonglan HuangGuangzhou Newborn Screening Center, Guangzhou Women and Children's Medical Center, Guangzhou Medical University, Guangzhou, Guangdong, China.
Jizhen FengDepartment of Genetics, Shijiazhuang Maternal and Child Health Hospital, Shijiazhuang, Hebei, China.
Yinhong ZhangDepartment of Medical Genetics, NHC Key Laboratory of Preconception Health Birth in Western China, The First People's Hospital of Yunnan Province, Affiliated Hospital of Kunming University of Science and Technology, Kunming, Yunnan, China.
Jingkun MiaoDepartment of Pediatrics, Chongqing Health Center for Women and Children & Women and Children's Hospital of Chongqing Medical University, Chongqing, China.
Xiaohua WangDepartment of Genetics, Inner Mongolia Maternity and Child Health Care Hospital, Hohhot, Inner Mongolia, China.
Yulin LiNeonatal Disease Screening Center, Jinan Maternity and Child Health Hospital Affiliated to Shandong First Medical University, Jinan, China.
Cidan HuangNeonatal Disease Screening Center, Hainan Women and Children's Medical Center, Haikou, Hainan, China.
Weiwei JinBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Chengfang TangGuangzhou Newborn Screening Center, Guangzhou Women and Children's Medical Center, Guangzhou Medical University, Guangzhou, Guangdong, China.
Lulu FengDepartment of Genetics, Shijiazhuang Maternal and Child Health Hospital, Shijiazhuang, Hebei, China.
Yifan YinDepartment of Pediatrics, Chongqing Health Center for Women and Children & Women and Children's Hospital of Chongqing Medical University, Chongqing, China.
Bo ZhuDepartment of Genetics, Inner Mongolia Maternity and Child Health Care Hospital, Hohhot, Inner Mongolia, China.
Meng SunNeonatal Disease Screening Center, Jinan Maternity and Child Health Hospital Affiliated to Shandong First Medical University, Jinan, China.
Xiulian LiuNeonatal Disease Screening Center, Hainan Women and Children's Medical Center, Haikou, Hainan, China.
Jiale XiangBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Minyi TanGuangzhou Newborn Screening Center, Guangzhou Women and Children's Medical Center, Guangzhou Medical University, Guangzhou, Guangdong, China.
Liyun JiaDepartment of Genetics, Shijiazhuang Maternal and Child Health Hospital, Shijiazhuang, Hebei, China.
Lei ChenBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Hui HuangBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Huanhuan PengBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Xin SunDepartment of Pediatric Endocrinology and Genetic Metabolism, Shanghai Institute for Pediatric Research & Center for Clinical Innovation and Research, Xinhua Hospital, Shanghai Jiaotong University School of Medicine, Shanghai, China.
Xuefan GuDepartment of Pediatric Endocrinology and Genetic Metabolism, Shanghai Institute for Pediatric Research & Center for Clinical Innovation and Research, Xinhua Hospital, Shanghai Jiaotong University School of Medicine, Shanghai, China.
Zhiyu PengBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Baosheng ZhuDepartment of Medical Genetics, NHC Key Laboratory of Preconception Health Birth in Western China, The First People's Hospital of Yunnan Province, Affiliated Hospital of Kunming University of Science and Technology, Kunming, Yunnan, China.
Hui ZouNeonatal Disease Screening Center, Jinan Maternity and Child Health Hospital Affiliated to Shandong First Medical University, Jinan, China.
Lianshu HanDepartment of Pediatric Endocrinology and Genetic Metabolism, Shanghai Institute for Pediatric Research & Center for Clinical Innovation and Research, Xinhua Hospital, Shanghai Jiaotong University School of Medicine, Shanghai, China.
BGI GenomicsXinHua Hospital · CNGuangzhou Medical University · CNInner Mongolia Maternal and Child Health · CNBGI Group (China) · CNShandong First Medical University · CNChildren's Hospital of Chongqing Medical University · CNChongqing Medical University · CNKunming University of Science and Technology · CNShandong Maternal and Child Health Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Importance: Newborn screening via biochemical tests is in use worldwide. The availability of genetic sequencing has allowed rapid screening for a substantial number of monogenic disorders. However, the outcomes of this strategy have not been evaluated in a general newborn population. Objective: To evaluate the outcomes of applying gene panel sequencing as a first-tier newborn screening test. Design, Setting, and Participants: This cohort study included newborns who were prospectively recruited from 8 screening centers in China between February 21 and December 31, 2021. Neonates with positive results were followed up before July 5, 2022. Exposures: All participants were concurrently screened using dried blood spots. The screen consisted of biochemical screening tests and a targeted gene panel sequencing test for 128 conditions. The biochemical and genomic tests could both detect 43 of the conditions, whereas the other 85 conditions were screened solely by the gene panel. Main Outcomes and Measures: The primary outcomes were the number of patients detected by gene panel sequencing but undetected by the biochemical test. Results: This study prospectively recruited 29 601 newborns (15 357 [51.2%] male). The mean (SD) gestational age was 39.0 (1.5) weeks, and the mean (SD) birth weight was 3273 (457) g. The gene panel sequencing screened 813 infants (2.7%; 95% CI, 2.6%-2.9%) as positive. By the date of follow-up, 402 infants (1.4%; 95% CI, 1.2%-1.5%) had been diagnosed, indicating the positive predictive value was 50.4% (95% CI, 50.0%-53.9%). The gene panel sequencing identified 59 patients undetected by biochemical tests, including 20 patients affected by biochemically and genetically screened disorders and 39 patients affected by solely genetically screened disorders, which translates into 1 out of every 500 newborns (95% CI, 1/385-1/625) benefiting from the implementation of gene panels as a first-tier screening test. Conclusions and Relevance: In this cohort study, the use of gene panel sequencing in a general newborn population as a first-tier screening test improved the detection capability of traditional screening, providing an evidence-based suggestion that it could be considered as a crucial method for first-tier screening.

Indexed as

GenomicsNeonatal ScreeningBirth WeightChinaCohort StudiesFemaleHumansInfantInfant, NewbornMale

Identifiers

PMID37656460
PMCPMC10474521
OpenAlexW4386346491

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.