Evidence map›Paper›PMID 37654485›Full record

ArticleFrontiers in immunology2023

Single-cell RNA sequencing reveals distinct chondrocyte states in femoral cartilage under weight-bearing load in Rheumatoid arthritis.

Mingyue Yan, Zewen Sun, Junjie Wang, Haibo Zhao, Tengbo Yu, Yingze Zhang, Tianrui Wang

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Mingyue YanDepartment of Orthopedics, The Affiliated Hospital of Qingdao University, Qingdao, Shandong, China.
Zewen SunDepartment of Orthopedics, The Affiliated Hospital of Qingdao University, Qingdao, Shandong, China.
Junjie WangDepartment of Orthopedics, The Affiliated Hospital of Qingdao University, Qingdao, Shandong, China.
Haibo ZhaoDepartment of Orthopedics, The Affiliated Hospital of Qingdao University, Qingdao, Shandong, China.
Tengbo YuInstitute of Sports Medicine and Health, Qingdao University, Qingdao, Shandong, China.
Yingze ZhangDepartment of Orthopedics, The Third Hospital of Hebei Medical University, Shijiazhuang, Hebei, China.
Tianrui WangDepartment of Orthopedics, The Affiliated Hospital of Qingdao University, Qingdao, Shandong, China.
Qingdao University · CNAffiliated Hospital of Qingdao University · CNThird Hospital of Hebei Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Rheumatoid arthritis (RA) is a common autoimmune joint disease, the pathogenesis of which is still unclear. Cartilage damage is one of the main manifestations of the disease. Chondrocytes are the main functional component of articular cartilage, which is relevant to disease progression. Mechanical loading affects the structure and function of articular cartilage and chondrocytes, but the effect of weight bearing on chondrocytes in rheumatoid arthritis is still unclear. Methods: In this paper, single-cell RNA sequencing (scRNA-seq) was performed on collected cartilage from the weight-bearing region (Fb group) and non-weight-bearing region (Fnb group) of the femur, and the differences between the Fb and Fnb groups were analyzed by cell type annotation, pseudotime analysis, enrichment analysis, cell interactions, single-cell regulatory network inference and clustering (SCENIC) for each cell type. Results: A total of 87,542 cells were analyzed and divided into 9 clusters. Six chondrocyte subpopulations were finally identified by cellular annotation, and two new chondrocyte subtypes were annotated as immune-associated chondrocytes. The presence of each chondrocyte subpopulation and its distribution were verified using immunohistochemical staining (IHC). In this study, the atlas of femoral cartilage in knee rheumatoid arthritis and 2 new immune-related chondrocytes were validated using scRNA-seq and IHC, and chondrocytes in the weight-bearing and non-weight-bearing regions of the femur were compared. There might be a process of macrophage polarization transition in MCs in response to mechanical loading, as in macrophages. Conclusion: Two new immune-associated chondrocytes were identified. MCs have contrasting functions in different regions, which might provide insight into the role of immune and mechanical loading on chondrocytes in the development of knee rheumatoid osteoarthritis.

Indexed as

Arthritis, RheumatoidAutoimmune DiseasesCartilage, ArticularOsteoarthritis, KneeChondrocytesHumansSequence Analysis, RNAWeight-BearingchondrocyteimmuneRheumatoid arthritissingle-cell RNA sequencingweight-bearing region

Identifiers

PMID37654485
PMCPMC10467429
OpenAlexW4385954610

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.