Evidence map›Paper›PMID 37653449›Full record

ArticlePlant methods2023

Establishment of virus-induced gene silencing (VIGS) system in Luffa acutangula using Phytoene desaturase (PDS) and tendril synthesis related gene (TEN).

Xiaoyu Qi, Qiaoping Mo, Jing Li, Zhibo Zi, Mengyun Xu, Suju Yue, Hongbo Zhao, Haisheng Zhu, Guoping Wang

Open access · goldAbstract read
In one paragraph

Article in Plant methods, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
7.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 18 citations in OpenAlex.

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  6. Genome-Wide Analysis ofPlants (Basel, Switzerland) · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Xiaoyu QiCollege of Horticulture, South China Agricultural University, Guangzhou, 510642, Guangdong, China.
Qiaoping MoCollege of Horticulture, South China Agricultural University, Guangzhou, 510642, Guangdong, China.
Jing LiCollege of Horticulture, South China Agricultural University, Guangzhou, 510642, Guangdong, China.
Zhibo ZiCollege of Horticulture, South China Agricultural University, Guangzhou, 510642, Guangdong, China.
Mengyun XuCollege of Horticulture, South China Agricultural University, Guangzhou, 510642, Guangdong, China.
Suju YueCollege of Life Sciences, Zhongkai University of Agriculture and Engineering, Guangzhou, 510225, Guangdong, China.
Hongbo ZhaoCollege of Horticulture, South China Agricultural University, Guangzhou, 510642, Guangdong, China.
Haisheng ZhuFujian Key Laboratory of Vegetable Genetics and Breeding/Crops Research Institute, Fujian Academy of Agricultural Sciences, Fujian, 350013, Fuzhou, China. zhs0246@163.com.
Guoping WangCollege of Horticulture, South China Agricultural University, Guangzhou, 510642, Guangdong, China. gpwang@scau.edu.cn.
South China Agricultural University · CNFujian Academy of Agricultural Sciences · CNZhongkai University of Agriculture and Engineering · CN

Funding

Guangdong Agricultural Department 2022KJ106Guangdong Laboratory for Lingnan Modern Agriculture (Heyuan Branch) DT20220017Opening Foundation of Fujian Key Laboratory of Vegetable Genetics and Breeding FJVRC-2021-05
6 · The paper itself

Abstract

backgroundVirus-induced gene silencing (VIGS) is a reverse genetics technology that can efficiently and rapidly identify plant gene functions. Although a variety of VIGS vectors have been successfully used in plants, only a few reports on VIGS technology in Luffa exist.

resultsIn the present study, a new cucumber green mottle mosaic virus (CGMMV)-based VIGS vector, pV190, was applied to establish the CGMMV-VIGS to investigate the feasibility of the silencing system for Luffa. Phytoene desaturase (PDS) gene was initially selected as a VIGS marker gene to construct a recombinant vector. Plants infected with Agrobacterium harboring pV190-PDS successfully induced effective silencing in Luffa, and an effective gene silencing phenotype with obvious photobleaching was observed. To further validate the efficiency, we selected TEN for gene-silencing, which encodes a CYC/TB1-like transcription factor and is involved in tendril development. Luffa plants inoculated with the pV190-TEN exhibited shorter tendril length and nodal positions where tendrils appear are higher compared to those of non-inoculated plants. RT-qPCR showed that the expression levels of PDS and TEN were significantly reduced in the CGMMV-VIGS plants. Moreover, we evaluated the CGMMV-VIGS efficiency in three cucurbits, including cucumber, ridge gourd, and bottle gourd.

conclusionWe successfully established a CGMMV-based VIGS system on ridge gourd and used marker genes to identify the feasibility of the silencing system in Luffa leaves and stems.

Indexed as

Cucumber green mottle mosaic virus (CGMMV)LuffaPDSTENVIGS

Identifiers

PMID37653449
PMCPMC10470258
OpenAlexW4386308140

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.