Evidence map›Paper›PMID 37653172›Full record

ArticleNature chemical biology2024

Calcium-gated potassium channel blockade via membrane-facing fenestrations.

Chen Fan, Emelie Flood, Nattakan Sukomon, Shubhangi Agarwal, Toby W Allen, Crina M Nimigean

Open access · greenAbstract read
In one paragraph

Article in Nature chemical biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 13 citations in OpenAlex.

  1. Gating crosstalk in potassium channels.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  10. CaProtein science : a publication of the Protein Society · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 4 countries.

Chen FanDepartment of Anesthesiology, Weill Cornell Medicine, New York, NY, USA.
Emelie Flood *School of Science, RMIT University, Melbourne, Victoria, Australia.ORCID 0000-0002-1981-9636
Nattakan Sukomon *Department of Anesthesiology, Weill Cornell Medicine, New York, NY, USA.ORCID 0000-0002-8443-9533
Shubhangi AgarwalDepartment of Anesthesiology, Weill Cornell Medicine, New York, NY, USA.
Toby W AllenSchool of Science, RMIT University, Melbourne, Victoria, Australia. toby.allen@rmit.edu.au.ORCID 0000-0002-3521-7950
Crina M NimigeanDepartment of Anesthesiology, Weill Cornell Medicine, New York, NY, USA. crn2002@med.cornell.edu.ORCID 0000-0002-6254-4447
Cornell University · USMIT University · MKSchrodinger (United States) · USStockholm University · SE

Funding

TRD #3: An automated and streamlined pipeline for in-situ molecular microscopyP41GM103310 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI DE MARCO, ALEX, KIEFT, JEFFREY S · 2012 to 2021
$14.7M
Molecular Mechanisms of Potassium Channel Permeation and GatingR01GM088352 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI NIMIGEAN, CRINA M · 2010 to 2025
$5.6M
Innovative Supercomputing for Breakthrough Molecular DynamicsRC2GM093307 · NIGMS · CARNEGIE-MELLON UNIVERSITY · PI DITTRICH, MARKUS · 2009 to 2010
$2.7M
NIGMS NIH HHS P41 GM103310NIGMS NIH HHS R01 GM088352NIGMS NIH HHS RC2 GM093307
6 · The paper itself

Abstract

Quaternary ammonium blockers were previously shown to bind in the pore to block both open and closed conformations of large-conductance calcium-activated potassium (BK and MthK) channels. Because blocker entry was assumed through the intracellular entryway (bundle crossing), closed-pore access suggested that the gate was not at the bundle crossing. Structures of closed MthK, a Methanobacterium thermoautotrophicum homolog of BK channels, revealed a tightly constricted intracellular gate, leading us to investigate the membrane-facing fenestrations as alternative pathways for blocker access directly from the membrane. Atomistic free energy simulations showed that intracellular blockers indeed access the pore through the fenestrations, and a mutant channel with narrower fenestrations displayed no closed-state TPeA block at concentrations that blocked the wild-type channel. Apo BK channels display similar fenestrations, suggesting that blockers may use them as access paths into closed channels. Thus, membrane fenestrations represent a non-canonical pathway for selective targeting of specific channel conformations, opening novel ways to selectively drug BK channels.

Indexed as

CalciumLarge-Conductance Calcium-Activated Potassium ChannelsCalcium ChannelsMolecular ConformationPotassiumCalciumCalcium ChannelsLarge-Conductance Calcium-Activated Potassium ChannelsPotassium

Identifiers

PMID37653172
PMCPMC10847966
OpenAlexW4386324499

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.