Evidence map›Paper›PMID 37653089›Full record

ArticleCommunications biology2023

Microbiomes and metabolomes of dominant coral reef primary producers illustrate a potential role for immunolipids in marine symbioses.

Helena Mannochio-Russo, Sean O I Swift, Kirsten K Nakayama, Christopher B Wall, Emily C Gentry, Morgan Panitchpakdi, Andrés M Caraballo-Rodriguez, Allegra T Aron, Daniel Petras, Kathleen Dorrestein and 16 more

Abstract read
In one paragraph

Article in Communications biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors.

Helena Mannochio-Russo *Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, 92093, USA. helenamrusso@gmail.com.ORCID http://orcid.org/0000-0002-4961-2353
Sean O I Swift *Daniel K. Inouye Center for Microbial Oceanography: Research and Education, Department of Oceanography and Sea Grant College Program, University of Hawai'i at Mānoa, Honolulu, HI, 96822, USA. seanoiswift@gmail.com.ORCID http://orcid.org/0000-0002-1170-4711
Kirsten K NakayamaPacific Biosciences Research Center, University of Hawai'i at Mānoa, Honolulu, HI, 96822, USA.
Christopher B WallPacific Biosciences Research Center, University of Hawai'i at Mānoa, Honolulu, HI, 96822, USA.
Emily C GentrySkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, 92093, USA.ORCID http://orcid.org/0000-0002-0016-8132
Morgan PanitchpakdiSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, 92093, USA.
Andrés M Caraballo-RodriguezSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, 92093, USA.
Allegra T AronSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, 92093, USA.
Daniel PetrasSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, 92093, USA.ORCID http://orcid.org/0000-0002-6561-3022
Kathleen DorresteinSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, 92093, USA.
Tatiana K DorresteinUniversity City High School, San Diego, CA, 92122, USA.
Taylor M WilliamsMarine Option Program, University of Hawai'i at Mānoa, Honolulu, HI, 96822, USA.
Eileen M NalleyHawai'i Sea Grant College Program, University of Hawai'i at Mānoa, Honolulu, HI, 96822, USA.
Noam T Altman-KurosakiSchool of Biological Sciences, Georgia Institute of Technology, 311 Ferst Drive, Atlanta, GA, 30332, USA.
Mike MartinelliUniversity of Hawai'i at Mānoa, Honolulu, HI, 96822, USA.
Jeff Y KuwabaraMarine Option Program, University of Hawai'i at Mānoa, Honolulu, HI, 96822, USA.
John L DarcyPacific Biosciences Research Center, University of Hawai'i at Mānoa, Honolulu, HI, 96822, USA.
Vanderlan S BolzaniDepartment of Biochemistry and Organic Chemistry, Institute of Chemistry, São Paulo State University, Araraquara, SP, 14800-060, Brazil.
Linda Wegley KellyScripps Institution of Oceanography, University of California San Diego, La Jolla, California, CA, USA.
Camilo MoraGeography, University of Hawai'i at Mānoa, Honolulu, HI, 96822, USA.
Joanne Y YewPacific Biosciences Research Center, University of Hawai'i at Mānoa, Honolulu, HI, 96822, USA.ORCID http://orcid.org/0000-0003-4851-912X
Anthony S AmendPacific Biosciences Research Center, University of Hawai'i at Mānoa, Honolulu, HI, 96822, USA.
Margaret McFall-NgaiPacific Biosciences Research Center, University of Hawai'i at Mānoa, Honolulu, HI, 96822, USA.ORCID http://orcid.org/0000-0002-6046-6238
Nicole A HynsonPacific Biosciences Research Center, University of Hawai'i at Mānoa, Honolulu, HI, 96822, USA.ORCID http://orcid.org/0000-0001-7098-9641
Pieter C DorresteinSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, 92093, USA.ORCID http://orcid.org/0000-0002-3003-1030
Craig E NelsonDaniel K. Inouye Center for Microbial Oceanography: Research and Education, Department of Oceanography and Sea Grant College Program, University of Hawai'i at Mānoa, Honolulu, HI, 96822, USA.ORCID http://orcid.org/0000-0003-2525-3496

Funding

The Control of Insect Metabolism through Nutrition-based SymbiosisP20GM125508 · NIGMS · UNIVERSITY OF HAWAII AT MANOA · PI Anthony Amend · 2018 to 2026
$21.2M
NIGMS NIH HHS P20 GM125508
6 · The paper itself

Abstract

The dominant benthic primary producers in coral reef ecosystems are complex holobionts with diverse microbiomes and metabolomes. In this study, we characterize the tissue metabolomes and microbiomes of corals, macroalgae, and crustose coralline algae via an intensive, replicated synoptic survey of a single coral reef system (Waimea Bay, O'ahu, Hawaii) and use these results to define associations between microbial taxa and metabolites specific to different hosts. Our results quantify and constrain the degree of host specificity of tissue metabolomes and microbiomes at both phylum and genus level. Both microbiome and metabolomes were distinct between calcifiers (corals and CCA) and erect macroalgae. Moreover, our multi-omics investigations highlight common lipid-based immune response pathways across host organisms. In addition, we observed strong covariation among several specific microbial taxa and metabolite classes, suggesting new metabolic roles of symbiosis to further explore.

Indexed as

AnthozoaMicrobiotaSeaweedAnimalsCoral ReefsMetabolomeSymbiosis

Identifiers

PMID37653089
PMCPMC10471604

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.