Evidence map›Paper›PMID 37652992›Full record

ArticleScientific reports2023

Biochemical analysis of Komagataella phaffii oxidative folding proposes novel regulatory mechanisms of disulfide bond formation in yeast.

Arianna Palma, Lukas A Rettenbacher, Antti Moilanen, Mirva Saaranen, Christian Pacheco-Martinez, Brigitte Gasser, Lloyd Ruddock

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Metabolic engineering ofApplied and environmental microbiology · 2026
    Review
  2. Chemical reviews · 2026
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Arianna PalmaDepartment of Biotechnology, University of Natural Resources and Life Sciences, Vienna, Austria.
Lukas A RettenbacherSchool of Biosciences, University of Kent, Canterbury, UK.
Antti MoilanenFaculty of Biochemistry and Molecular Medicine, University of Oulu, Oulu, Finland.
Mirva SaaranenFaculty of Biochemistry and Molecular Medicine, University of Oulu, Oulu, Finland.
Christian Pacheco-MartinezDepartment of Biotechnology, University of Natural Resources and Life Sciences, Vienna, Austria.
Brigitte GasserDepartment of Biotechnology, University of Natural Resources and Life Sciences, Vienna, Austria. brigitte.gasser@boku.at.
Lloyd RuddockFaculty of Biochemistry and Molecular Medicine, University of Oulu, Oulu, Finland. lloyd.ruddock@oulu.fi.
University of Oulu · FIBOKU University · ATAustrian Centre of Industrial Biotechnology (Austria) · ATUniversity of Kent · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oxidative protein folding in the endoplasmic reticulum (ER) is driven mainly by protein disulfide isomerase PDI and oxidoreductin Ero1. Their activity is tightly regulated and interconnected with the unfolded protein response (UPR). The mechanisms of disulfide bond formation have mainly been studied in human or in the yeast Saccharomyces cerevisiae. Here we analyze the kinetics of disulfide bond formation in the non-conventional yeast Komagataella phaffii, a common host for the production of recombinant secretory proteins. Surprisingly, we found significant differences with both the human and S. cerevisiae systems. Specifically, we report an inactive disulfide linked complex formed by K. phaffii Ero1 and Pdi1, similarly to the human orthologs, but not described in yeast before. Furthermore, we show how the interaction between K. phaffii Pdi1 and Ero1 is unaffected by the introduction of unfolded substrate into the system. This is drastically opposed to the previously observed behavior of the human pathway, suggesting a different regulation of the UPR and/or possibly different interaction mechanics between K. phaffii Pdi1 and Ero1.

Indexed as

Saccharomyces cerevisiaeYeast, DriedDisulfidesHumansOxidative StressSaccharomycetalesDisulfides

Identifiers

PMID37652992
PMCPMC10471769
OpenAlexW4386325208

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.