Evidence map›Paper›PMID 37652934›Full record

ArticleNature communications2023

Synthesize high-dimensional longitudinal electronic health records via hierarchical autoregressive language model.

Brandon Theodorou, Cao Xiao, Jimeng Sun

Erratum issuedAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 31 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors.

Brandon TheodorouUniversity of Illinois at Urbana-Champaign, 201 North Goodwin Avenue, Urbana, IL, USA.
Cao XiaoMedisyn Inc., Las Vegas, NV, USA.
Jimeng SunUniversity of Illinois at Urbana-Champaign, 201 North Goodwin Avenue, Urbana, IL, USA. jimeng@illinois.edu.ORCID http://orcid.org/0000-0003-1512-6426

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Synthetic electronic health records (EHRs) that are both realistic and privacy-preserving offer alternatives to real EHRs for machine learning (ML) and statistical analysis. However, generating high-fidelity EHR data in its original, high-dimensional form poses challenges for existing methods. We propose Hierarchical Autoregressive Language mOdel (HALO) for generating longitudinal, high-dimensional EHR, which preserve the statistical properties of real EHRs and can train accurate ML models without privacy concerns. HALO generates a probability density function over medical codes, clinical visits, and patient records, allowing for generating realistic EHR data without requiring variable selection or aggregation. Extensive experiments demonstrated that HALO can generate high-fidelity data with high-dimensional disease code probabilities closely mirroring (above 0.9 R

Indexed as

Electronic Health RecordsLanguageHumansLikelihood FunctionsMachine LearningPrivacy

Identifiers

PMID37652934
PMCPMC10471716

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.