Evidence map›Paper›PMID 37651466›Full record

ArticlePLoS pathogens2023

A single inactivating amino acid change in the SARS-CoV-2 NSP3 Mac1 domain attenuates viral replication in vivo.

Taha Y Taha, Rahul K Suryawanshi, Irene P Chen, Galen J Correy, Maria McCavitt-Malvido, Patrick C O'Leary, Manasi P Jogalekar, Morgan E Diolaiti, Gabriella R Kimmerly, Chia-Lin Tsou and 7 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
7.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Review
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  8. CACHE Challenge #3: Targeting the Nsp3 Macrodomain of SARS-CoV-2.Journal of chemical information and modeling · 2026
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  16. The Mac1 ADP-ribosylhydrolase is a Therapeutic Target for SARS-CoV-2.bioRxiv : the preprint server for biology · 2025
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 1 country.

Taha Y TahaGladstone Institute of Virology, Gladstone Institutes, San Francisco, California, United States of America.ORCID 0000-0002-7344-7490
Rahul K SuryawanshiGladstone Institute of Virology, Gladstone Institutes, San Francisco, California, United States of America.
Irene P ChenGladstone Institute of Virology, Gladstone Institutes, San Francisco, California, United States of America.
Galen J CorreyQuantitative Biosciences Institute (QBI) COVID-19 Research Group (QCRG), San Francisco, California, United States of America.
Maria McCavitt-MalvidoGladstone Institute of Virology, Gladstone Institutes, San Francisco, California, United States of America.
Patrick C O'LearyQuantitative Biosciences Institute (QBI) COVID-19 Research Group (QCRG), San Francisco, California, United States of America.
Manasi P JogalekarQuantitative Biosciences Institute (QBI) COVID-19 Research Group (QCRG), San Francisco, California, United States of America.
Morgan E DiolaitiQuantitative Biosciences Institute (QBI) COVID-19 Research Group (QCRG), San Francisco, California, United States of America.
Gabriella R KimmerlyGladstone Institute of Virology, Gladstone Institutes, San Francisco, California, United States of America.
Chia-Lin TsouGladstone Institute of Virology, Gladstone Institutes, San Francisco, California, United States of America.
Ronnie GasconGladstone Institute of Virology, Gladstone Institutes, San Francisco, California, United States of America.
Mauricio MontanoGladstone Institute of Virology, Gladstone Institutes, San Francisco, California, United States of America.
Luis Martinez-SobridoQuantitative Biosciences Institute (QBI) COVID-19 Research Group (QCRG), San Francisco, California, United States of America.
Nevan J KroganQuantitative Biosciences Institute (QBI) COVID-19 Research Group (QCRG), San Francisco, California, United States of America.
Alan AshworthQuantitative Biosciences Institute (QBI) COVID-19 Research Group (QCRG), San Francisco, California, United States of America.
James S FraserQuantitative Biosciences Institute (QBI) COVID-19 Research Group (QCRG), San Francisco, California, United States of America.
Melanie OttGladstone Institute of Virology, Gladstone Institutes, San Francisco, California, United States of America.ORCID 0000-0002-5697-1274
Gladstone Institutes · USQuantitative BioSciences · USUniversity of California, San Francisco · USTexas Biomedical Research Institute · US

Funding

Targeting Viroporins and Coronavirus M ProteinU19AI171110 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Nevan J Krogan · 2022 to 2026
$103.4M
User Training and OutreachP30GM124169 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI PAUL David ADAMS, Gregory L Hura · 2017 to 2026
$28.6M
RESEARCH PROJECT 2U19AI135990 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Nevan J Krogan · 2018 to 2026
$21.4M
Suppression of Host Antiviral Responses by a SARS-CoV-2 Histone MimeticF31AI164671 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CHEN, IRENE PO-RU · 2021 to 2022
$82k
NIAID NIH HHS F31 AI164671NIAID NIH HHS U19 AI135990NIAID NIH HHS U19 AI171110NIGMS NIH HHS P30 GM124169
6 · The paper itself

Abstract

Despite unprecedented efforts, our therapeutic arsenal against SARS-CoV-2 remains limited. The conserved macrodomain 1 (Mac1) in NSP3 is an enzyme exhibiting ADP-ribosylhydrolase activity and a possible drug target. To determine the role of Mac1 catalytic activity in viral replication, we generated recombinant viruses and replicons encoding a catalytically inactive NSP3 Mac1 domain by mutating a critical asparagine in the active site. While substitution to alanine (N40A) reduced catalytic activity by ~10-fold, mutations to aspartic acid (N40D) reduced activity by ~100-fold relative to wild-type. Importantly, the N40A mutation rendered Mac1 unstable in vitro and lowered expression levels in bacterial and mammalian cells. When incorporated into SARS-CoV-2 molecular clones, the N40D mutant only modestly affected viral fitness in immortalized cell lines, but reduced viral replication in human airway organoids by 10-fold. In mice, the N40D mutant replicated at >1000-fold lower levels compared to the wild-type virus while inducing a robust interferon response; all animals infected with the mutant virus survived infection. Our data validate the critical role of SARS-CoV-2 NSP3 Mac1 catalytic activity in viral replication and as a promising therapeutic target to develop antivirals.

Indexed as

Coronavirus Papain-Like ProteasesSARS-CoV-2Virus ReplicationAlanineAnimalsAntiviral AgentsHumansMiceAlanineAntiviral AgentsCoronavirus Papain-Like Proteasespapain-like protease, SARS-CoV-2

Identifiers

PMID37651466
PMCPMC10499221
OpenAlexW4386317380

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.