Evidence map›Paper›PMID 37651462›Full record

ArticlePloS one2023

Detailed characterization of Redondovirus in saliva of SARS-CoV-2-infected individuals in Sao Paulo, Brazil.

Antonio Charlys da Costa, Maria C Mendes-Correa, Tania Regina Tozetto-Mendoza, Lucy S Villas-Boas, Anderson Vicente de Paula, Heuder Gustavo Oliveira Paiao, Fabio E Leal, Noely E Ferreira, Layla Honorato, Elcio Leal and 5 more

Abstract read
In one paragraph

Article in PloS one, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Antonio Charlys da CostaLaboratório de Investigação Médica em Virologia, Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.
Maria C Mendes-CorreaLaboratório de Investigação Médica em Virologia, Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.ORCID 0000-0001-5655-8108
Tania Regina Tozetto-MendozaLaboratório de Investigação Médica em Virologia, Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.
Lucy S Villas-BoasLaboratório de Investigação Médica em Virologia, Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.
Anderson Vicente de PaulaLaboratório de Investigação Médica em Virologia, Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.
Heuder Gustavo Oliveira PaiaoLaboratório de Investigação Médica em Virologia, Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.
Fabio E LealFaculdade de Medicina da Universidade Municipal de Sao Caetano do Sul, São Paulo, Brazil.ORCID 0000-0003-1986-3765
Noely E FerreiraLaboratório de Investigação Médica em Virologia, Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.
Layla HonoratoLaboratório de Investigação Médica em Virologia, Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.ORCID 0000-0001-7084-3095
Elcio LealLaboratório de Diversidade Viral, Instituto de Ciências Biológicas, Universidade Federal do Pará, Pará, Brazil.ORCID 0000-0003-3463-0492
Giuliano GrandiUniversidade Federal de São Paulo, São Paulo, Brazil.ORCID 0000-0003-3846-7506
Vanessa Dos Santos MoraisDepartamento de Molestias Infecciosas e Parasitarias da Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.
Erika R ManuliDepartamento de Molestias Infecciosas e Parasitarias da Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.
Ester C SabinoLaboratório de Investigação Médica em Virologia, Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.
Steven S WitkinLaboratório de Investigação Médica em Virologia, Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.ORCID 0000-0002-3502-3929

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRedondovirus (ReDoV) is a DNA virus present in the respiratory tract of many healthy individuals. Since SARS-CoV-2, the virus responsible for COVID-19, also primarily infects the same site, we evaluated whether ReDoV was present at increased frequency in patients with COVID-19 and influenced infection parameters.

methodsSaliva samples were collected weekly from 59 individuals with COVID-19 and from 132 controls. ReDoV was detected by polymerase chain reaction and the genotypes were identified by metagenomics. Torque Teno Virus (TTV) in these samples were previously reported.

resultsReDoV was detected in saliva more frequently from COVID-19 patients (72.9%) than from controls (50.0%) (p = 0.0015). There were no associations between ReDoV detection and either continuous or intermittent SARS-CoV-2 shedding, the duration of SARS-CoV-2 detection in saliva, patients' sex or if infection was by the B1 or Gamma strain. The two ReDoV strains, Brisavirus and Vientovirus, were present in equivalent frequencies in ReDoV-positive COVID-19 patients and controls. Phylogenetic analysis suggested that the two ReDoV strains in Brazil were similar to strains previously detected on other continents.

conclusionReDoV expression in saliva is increased in males and females in Brazil with mild COVID-19 but its presence does not appear to influence properties of the SARS-CoV-2 infection.

Indexed as

COVID-19SARS-CoV-2BrazilFemaleHumansMalePhylogenySaliva

Identifiers

PMID37651462
PMCPMC10470920

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.