Evidence map›Paper›PMID 37649117›Full record

ArticleStem cell research & therapy2023

Photo-click hydrogels for 3D in situ differentiation of pancreatic progenitors from induced pluripotent stem cells.

Matthew R Arkenberg, Yoshitomo Ueda, Eri Hashino, Chien-Chi Lin

Open access · goldAbstract read
In one paragraph

Article in Stem cell research & therapy, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Matthew R ArkenbergWeldon School of Biomedical Engineering, Purdue University, West Lafayette, IN, 47907, USA.
Yoshitomo UedaDepartment of Otolaryngology-Head and Neck Surgery, Indiana University School of Medicine, Indianapolis, IN, 46202, USA.
Eri HashinoDepartment of Otolaryngology-Head and Neck Surgery, Indiana University School of Medicine, Indianapolis, IN, 46202, USA.
Chien-Chi LinWeldon School of Biomedical Engineering, Purdue University, West Lafayette, IN, 47907, USA. lincc@iupui.edu.ORCID http://orcid.org/0000-0002-4175-8796
Indiana University School of MedicineIndiana University Health · USPurdue University West Lafayette · US

Funding

Modeling Inner Ear Differentiation with Pluripotent Stem CellsR01DC013294 · NIDCD · INDIANA UNIVERSITY INDIANAPOLIS · PI Eri Hashino · 2014 to 2026
$7.1M
Engineering High-Fidelity Human Cochlear OrganoidsR01DC020628 · NIDCD · INDIANA UNIVERSITY INDIANAPOLIS · PI Eri Hashino · 2022 to 2026
$3.3M
Dynamic Double Network Hydrogel for Generating Pancreatic Organoids from InducedPluripotent Stem CellsR01DK127436 · NIDDK · PURDUE UNIVERSITY · PI LIN, CHIEN-CHI · 2022 to 2025
$1.8M
BRAVE hydrogels for interrogating cell-matrix interactions in pancreatic desmoplasia: Admin SuppR01CA227737 · NCI · INDIANA UNIVERSITY INDIANAPOLIS · PI LIN, CHIEN-CHI · 2019 to 2022
$1.5M
NCI NIH HHS R01 CA227737NIDCD NIH HHS R01 DC013294NIDCD NIH HHS R01 DC020628NIDDK NIH HHS R01 DK127436
6 · The paper itself

Abstract

backgroundInduced pluripotent stem cells (iPSC) can be differentiated to cells in all three germ layers, as well as cells in the extraembryonic tissues. Efforts in iPSC differentiation into pancreatic progenitors in vitro have largely been focused on optimizing soluble growth cues in conventional two-dimensional (2D) culture, whereas the impact of three-dimensional (3D) matrix properties on the morphogenesis of iPSC remains elusive.

methodsIn this work, we employ gelatin-based thiol-norbornene photo-click hydrogels for in situ 3D differentiation of human iPSCs into pancreatic progenitors (PP). Molecular analysis and single-cell RNA-sequencing were utilized to elucidate on the distinct identities of subpopulations within the 2D and 3D differentiated cells.

resultsWe found that, while established soluble cues led to predominately PP cells in 2D culture, differentiation of iPSCs using the same soluble factors led to prominent branching morphogenesis, ductal network formation, and generation of diverse endoderm populations. Through single-cell RNA-sequencing, we found that 3D differentiation resulted in enrichments of pan-endodermal cells and ductal cells. We further noted the emergence of a group of extraembryonic cells in 3D, which was absent in 2D differentiation. The unexpected emergence of extraembryonic cells in 3D was found to be associated with enrichment of Wnt and BMP signaling pathways, which may have contributed to the emergence of diverse cell populations. The expressions of PP signature genes PDX1 and NKX6.1 were restored through inhibition of Wnt signaling at the beginning of the posterior foregut stage.

conclusionsTo our knowledge, this work established the first 3D hydrogel system for in situ differentiation of human iPSCs into PPs.

Indexed as

Induced Pluripotent Stem CellsCell DifferentiationHumansHydrogelsPancreasRNAHydrogelsRNAHydrogelsInduced pluripotent stem cellsPancreatic progenitorPhoto-click chemistrySingle-cell RNA-sequencingWnt signaling

Identifiers

PMID37649117
PMCPMC10469883
OpenAlexW4386278379

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.