Evidence map›Paper›PMID 37648722›Full record

ArticleScientific reports2023

Integrated multi-omics analysis reveals the molecular interplay between circadian clocks and cancer pathogenesis.

Andy Pérez-Villa, Gabriela Echeverría-Garcés, María José Ramos-Medina, Lavanya Prathap, Mayra Martínez-López, David Ramírez-Sánchez, Jennyfer M García-Cárdenas, Isaac Armendáriz-Castillo, Santiago Guerrero, Clara Paz and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
  2. Taming Light with Carbon Dots.Journal of fluorescence · 2026
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  4. Metastasis in biological time.Frontiers in cell and developmental biology · 2026
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  9. T cell exhaustion landscapes and therapeutic modulation in cancer immunity.Frontiers in cell and developmental biology · 2026
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  14. Reprogramming cancer immunity with next-generation combination therapies.Frontiers in cell and developmental biology · 2025
    Review
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  16. Deciphering organotropism reveals therapeutic targets in metastasis.Frontiers in cell and developmental biology · 2025
    Review
  17. Review
  18. Review
  19. Peripheral clocks and systemicFrontiers in endocrinology · 2025
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 4 countries.

Andy Pérez-Villa *Cancer Research Group (CRG), Faculty of Medicine, Universidad de Las Américas, Quito, Ecuador.
Gabriela Echeverría-Garcés *Latin American Network for the Implementation and Validation of Clinical Pharmacogenomics Guidelines (RELIVAF-CYTED), Santiago, Chile.
María José Ramos-MedinaGerman Cancer Research Center (DKFZ), Faculty of Biosciences, Heidelberg University, Heidelberg, Germany.
Lavanya PrathapDepartment of Anatomy, Saveetha Dental College and Hospital, Saveetha Institute of Medical and Technical Sciences, Chennai, India.
Mayra Martínez-LópezCancer Research Group (CRG), Faculty of Medicine, Universidad de Las Américas, Quito, Ecuador.
David Ramírez-SánchezCancer Research Group (CRG), Faculty of Medicine, Universidad de Las Américas, Quito, Ecuador.
Jennyfer M García-CárdenasLatin American Network for the Implementation and Validation of Clinical Pharmacogenomics Guidelines (RELIVAF-CYTED), Santiago, Chile.
Isaac Armendáriz-CastilloPrograma de Investigación en Salud Global, Facultad de Ciencias de la Salud, Universidad Internacional SEK, Quito, Ecuador.
Santiago GuerreroLatin American Network for the Implementation and Validation of Clinical Pharmacogenomics Guidelines (RELIVAF-CYTED), Santiago, Chile.
Clara PazGrupo de Investigación Bienestar, Salud y Sociedad, Universidad de Las Américas, Quito, Ecuador.
Andrés López-CortésCancer Research Group (CRG), Faculty of Medicine, Universidad de Las Américas, Quito, Ecuador. aalc84@gmail.com.
Universidad de Las Américas · ECUniversidad Internacional del Ecuador · ECUniversidad Internacional SEK · ECGerman Cancer Research Center · DEInstituto Nacional de Investigación en Salud Pública · ECSaveetha University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Circadian rhythms (CRs) are fundamental biological processes that significantly impact human well-being. Disruption of these rhythms can trigger insufficient neurocognitive development, insomnia, mental disorders, cardiovascular diseases, metabolic dysfunctions, and cancer. The field of chronobiology has increased our understanding of how rhythm disturbances contribute to cancer pathogenesis, and how circadian timing influences the efficacy of cancer treatments. As the circadian clock steadily gains recognition as an emerging factor in tumorigenesis, a thorough and comprehensive multi-omics analysis of CR genes/proteins has never been performed. To shed light on this, we performed, for the first time, an integrated data analysis encompassing genomic/transcriptomic alterations across 32 cancer types (n = 10,918 tumors) taken from the PanCancer Atlas, unfavorable prognostic protein analysis, protein-protein interactomics, and shortest distance score pathways to cancer hallmark phenotypes. This data mining strategy allowed us to unravel 31 essential CR-related proteins involved in the signaling crossroad between circadian rhythms and cancer. In the context of drugging the clock, we identified pharmacogenomic clinical annotations and drugs currently in late phase clinical trials that could be considered as potential cancer therapeutic strategies. These findings highlight the diverse roles of CR-related genes/proteins in the realm of cancer research and therapy.

Indexed as

Circadian ClocksNeoplasmsCarcinogenesisCircadian RhythmHumansMultiomics

Identifiers

PMID37648722
PMCPMC10469199
OpenAlexW4386289604

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.