Evidence map›Paper›PMID 37647532›Full record

ArticleThe Plant cell2023

Whole-genome sequencing of diverse wheat accessions uncovers genetic changes during modern breeding in China and the United States.

Jianqing Niu, Shengwei Ma, Shusong Zheng, Chi Zhang, Yaru Lu, Yaoqi Si, Shuiquan Tian, Xiaoli Shi, Xiaolin Liu, Muhammad Kashif Naeem and 16 more

Abstract read
In one paragraph

Article in The Plant cell, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

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0cells of the map it votes in
45citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed.

  1. Article
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  4. Watkins wheat landraces: a treasure of stripe rust resistance alleles identified using multi-model association analyses.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
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  7. Review
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  11. Genomic Insights into Winter Wheat Breeding for Severely Cold Climates.International journal of molecular sciences · 2026
    Article
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  13. Article
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  16. Development and Characterization of Wheat-Plants (Basel, Switzerland) · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

26 authors.

Jianqing NiuHainan Yazhou Bay Seed Laboratory, Hainan, Sanya 572024, China.ORCID 0000-0002-1449-4318
Shengwei MaHainan Yazhou Bay Seed Laboratory, Hainan, Sanya 572024, China.ORCID 0000-0001-6196-811X
Shusong ZhengState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.ORCID 0000-0001-8074-1009
Chi ZhangBGI Genomics, BGI-Shenzhen, Shenzhen 518083, China.ORCID 0000-0002-6281-4187
Yaru LuState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.ORCID 0000-0002-1940-2275
Yaoqi SiState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.ORCID 0000-0003-2545-444X
Shuiquan TianState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.ORCID 0009-0000-4480-1561
Xiaoli ShiState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.ORCID 0000-0003-4028-0804
Xiaolin LiuState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.ORCID 0009-0005-1099-9801
Muhammad Kashif NaeemState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.ORCID 0000-0003-2697-4957
Hua SunState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.ORCID 0000-0003-2169-0808
Yafei HuBGI Genomics, BGI-Shenzhen, Shenzhen 518083, China.ORCID 0009-0003-6069-4470
Huilan WuState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.ORCID 0000-0003-4030-4650
Yan CuiState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.ORCID 0000-0003-2509-2477
Chunlin ChenState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.ORCID 0000-0001-7214-9937
Wenbo LongState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.ORCID 0000-0002-9647-685X
Yue ZhangState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.ORCID 0009-0005-3121-8015
Mengjun GuState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.ORCID 0009-0000-9462-6511
Man CuiState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.ORCID 0009-0007-1090-8169
Qiao LuCollege of Advanced Agricultural Sciences, University of Chinese Academy of Sciences, Beijing 100049, China.ORCID 0009-0003-4477-3304
Wenjuan ZhouState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.ORCID 0009-0007-8108-1808
Junhua PengHuazhi Bio-tech Company Ltd., Changsha, Hunan 410125, China.ORCID 0000-0002-8428-3137
Eduard AkhunovWheat Genetic Resources Center, Kansas State University, Manhattan, KS 66506, USA.ORCID 0000-0002-0416-5211
Fei HeState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.ORCID 0000-0002-1165-3248
Shancen ZhaoBGI Genomics, BGI-Shenzhen, Shenzhen 518083, China.ORCID 0000-0001-8779-6969
Hong-Qing LingHainan Yazhou Bay Seed Laboratory, Hainan, Sanya 572024, China.ORCID 0000-0001-9988-2282

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Breeding has dramatically changed the plant architecture of wheat (Triticum aestivum), resulting in the development of high-yielding varieties adapted to modern farming systems. However, how wheat breeding shaped the genomic architecture of this crop remains poorly understood. Here, we performed a comprehensive comparative analysis of a whole-genome resequencing panel of 355 common wheat accessions (representing diverse landraces and modern cultivars from China and the United States) at the phenotypic and genomic levels. The genetic diversity of modern wheat cultivars was clearly reduced compared to landraces. Consistent with these genetic changes, most phenotypes of cultivars from China and the United States were significantly altered. Of the 21 agronomic traits investigated, 8 showed convergent changes between the 2 countries. Moreover, of the 207 loci associated with these 21 traits, more than half overlapped with genomic regions that showed evidence of selection. The distribution of selected loci between the Chinese and American cultivars suggests that breeding for increased productivity in these 2 regions was accomplished by pyramiding both shared and region-specific variants. This work provides a framework to understand the genetic architecture of the adaptation of wheat to diverse agricultural production environments, as well as guidelines for optimizing breeding strategies to design better wheat varieties.

Indexed as

Genome, PlantTriticumChinaGenetic VariationPhenotypePlant BreedingUnited States

Identifiers

PMID37647532
PMCPMC10689146

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.