Evidence map›Paper›PMID 37646443›Full record

ArticleThe Journal of parasitology2023

DOES TRYPANOSOMA EVANSI HAVE THE MAXICIRCLE GENE, OR CAN TRYPANOSOMA EQUIPERDUM BE ISOLATED FROM BOVINES?

Didik T Subekti, Fitrine Ekawasti, Zul Azmi, Ichwan Yuniarto, Sulinawati Fong, Yudha Fahrimal

Abstract read
In one paragraph

Article in The Journal of parasitology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Molecular identification of new Trypanosoma evansi type non-A/B isolates from buffaloes and cattle in Indonesia.Revista brasileira de parasitologia veterinaria = Brazilian journal of veterinary parasitology : Orgao Oficial do Colegio Brasileiro de Parasitologia Veterinaria · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Didik T SubektiCenter for Biomedical Research, Health Research Organization, National Research and Innovation Agency, Cibinong Science Center-JL. Raya Jakarta-Bogor Km. 46, Bogor 16911, West Jawa Province, Indonesia.ORCID 0000-0002-2649-0242
Fitrine EkawastiIndonesian Research Center for Veterinary Science, Agricultural Research and Development Agency, Indonesian Ministry of Agriculture, JL. RE. Martadinata 30, Bogor 16114, West Jawa Province, Indonesia.
Zul AzmiIndonesian Research Center for Veterinary Science, Agricultural Research and Development Agency, Indonesian Ministry of Agriculture, JL. RE. Martadinata 30, Bogor 16114, West Jawa Province, Indonesia.
Ichwan YuniartoAnimal Disease Investigation Center of Banjarbaru, Directorate of Animal Health, Indonesian Ministry of Agriculture, JL. Ambulung 24, South Loktabat, Banjarbaru 70712, South Borneo Province, Indonesia.
Sulinawati FongAnimal Disease Investigation Center of Lampung, Directorate of Animal Health, Indonesian Ministry of Agriculture, JL. Untung Suropati No. 2, Labuhan Ratu-Bandar Lampung 35142, Lampung Province, Indonesia.
Yudha FahrimalFaculty of Veterinary Medicine, Syiah Kuala University, Banda Aceh, Aceh Province, Indonesia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Identifying a trypanosome isolate is generally based on morphological observations and molecular identification of one of the genes, usually internal transcribed spacer 1 and 2 of ribosomal DNA (ITS1 rDNA, ITS2 rDNA), a variant surface glycoprotein of Rode Trypanozoon antigen type 1.2 (VSG RoTat 1.2), or expression site-associated genes (ESAG). However, this identification is insufficient because these genes cannot distinguish organisms in the subgenus Trypanozoon to the species level. A molecular approach using at least 5 sets of primers is needed, namely, ITS1, ESAG6/7, MINI, RoTat 1.2, and ND5, for stratified selection to obtain more targeted and conclusive results. Using this method to analyze isolates from Indonesia provided unexpected results: 9 isolates previously identified as Trypanozoon were found to have the kDNA maxicircle gene. Nine isolates of Trypanosoma equiperdum were identified for the first time in Indonesia, isolated from bovine (cattle and buffaloes). The identification of T. equiperdum in the 9 isolates was confirmed by analysis of the nucleotide sequence identity of the nad5-kDNA maxicircle gene.

Indexed as

DNA, KinetoplastTrypanosomaAnimalsBuffaloesCattleDNA, RibosomalGene ExpressionDNA, KinetoplastDNA, RibosomalBovineESAG6/7ITS1kDNA minicirclenad5-kDNA maxicircleTrypanosoma equiperdumTrypanosoma evansi

Identifiers

PMID37646443
PMCPMC10658868

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.