Evidence map›Paper›PMID 37644087›Full record

ArticleScientific reports2023

Mycobacterial DNA-binding protein 1 is critical for BCG survival in stressful environments and simultaneously regulates gene expression.

Amina K Shaban, Gebremichal Gebretsadik, Mariko Hakamata, Hayato Takihara, Erina Inouchi, Akihito Nishiyama, Yuriko Ozeki, Yoshitaka Tateishi, Yukiko Nishiuchi, Takehiro Yamaguchi and 3 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

Amina K ShabanDepartment of Bacteriology, School of Medicine, Niigata University, Niigata, Japan. kaboso90@gmail.com.
Gebremichal GebretsadikDepartment of Bacteriology, School of Medicine, Niigata University, Niigata, Japan.
Mariko HakamataDepartment of Bacteriology, School of Medicine, Niigata University, Niigata, Japan.
Hayato TakiharaBioinformatics Department, School of Medicine, Niigata University, Niigata, Japan.
Erina InouchiDepartment of Bacteriology, School of Medicine, Niigata University, Niigata, Japan.
Akihito NishiyamaDepartment of Bacteriology, School of Medicine, Niigata University, Niigata, Japan.
Yuriko OzekiDepartment of Bacteriology, School of Medicine, Niigata University, Niigata, Japan.
Yoshitaka TateishiDepartment of Bacteriology, School of Medicine, Niigata University, Niigata, Japan.
Yukiko NishiuchiDepartment of Bacteriology, School of Medicine, Niigata University, Niigata, Japan.
Takehiro YamaguchiDepartment of Bacteriology, School of Medicine, Niigata University, Niigata, Japan.
Naoya OharaDepartment of Oral Microbiology, Okayama University, Okayama, Japan.
Shujiro OkudaBioinformatics Department, School of Medicine, Niigata University, Niigata, Japan.
Sohkichi MatsumotoDepartment of Bacteriology, School of Medicine, Niigata University, Niigata, Japan. sohkichi@med.niigata-u.ac.jp.
Niigata University · JPAirlangga University · IDAsossa University · ETOkayama University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Survival of the live attenuated Bacillus Calmette-Guérin (BCG) vaccine amidst harsh host environments is key for BCG effectiveness as it allows continuous immune response induction and protection against tuberculosis. Mycobacterial DNA binding protein 1 (MDP1), a nucleoid associated protein, is essential in BCG. However, there is limited knowledge on the extent of MDP1 gene regulation and how this influences BCG survival. Here, we demonstrate that MDP1 conditional knockdown (cKD) BCG grows slower than vector control in vitro, and dies faster upon exposure to antibiotics (bedaquiline) and oxidative stress (H

Indexed as

BCG VaccineRenal Insufficiency, ChronicAcclimatizationAnimalsDNA-Binding ProteinsHydrogen PeroxideMiceBCG VaccineDNA-Binding ProteinsHydrogen Peroxide

Identifiers

PMID37644087
PMCPMC10465568
OpenAlexW4386257320

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.