Evidence map›Paper›PMID 37643813›Full record

ArticleRNA (New York, N.Y.)2023

Examining SRP pathway function in mRNA localization to the endoplasmic reticulum.

Jessica R Child, Alex C Hofler, Qiang Chen, Brenda H Yang, JohnCarlo Kristofich, Tianli Zheng, Molly M Hannigan, Andrew L Elles, David W Reid, Christopher V Nicchitta

Open access · greenAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Jessica R ChildDepartment of Cell Biology, Duke University School of Medicine, Durham, North Carolina 27710, USA.ORCID 0000-0003-4429-164X
Alex C HoflerDepartment of Biochemistry, Duke University School of Medicine, Durham, North Carolina 27710, USA.ORCID 0000-0003-2969-0984
Qiang ChenDepartment of Cell Biology, Duke University School of Medicine, Durham, North Carolina 27710, USA.
Brenda H YangDepartment of Cell Biology, Duke University School of Medicine, Durham, North Carolina 27710, USA.
JohnCarlo KristofichDepartment of Cell Biology, Duke University School of Medicine, Durham, North Carolina 27710, USA.ORCID 0000-0001-6815-8750
Tianli ZhengDepartment of Cell Biology, Duke University School of Medicine, Durham, North Carolina 27710, USA.ORCID 0000-0002-2148-5030
Molly M HanniganDepartment of Cell Biology, Duke University School of Medicine, Durham, North Carolina 27710, USA.ORCID 0000-0003-1124-2577
Andrew L EllesDepartment of Cell Biology, Duke University School of Medicine, Durham, North Carolina 27710, USA.ORCID 0000-0003-2374-6625
David W ReidDepartment of Cell Biology, Duke University School of Medicine, Durham, North Carolina 27710, USA.
Christopher V NicchittaDepartment of Cell Biology, Duke University School of Medicine, Durham, North Carolina 27710, USA christopher.nicchitta@duke.edu.ORCID 0000-0001-7889-1155
Duke University · US

Funding

Research Supplements to Promote Diversity in Health-Related ResearchR35GM139480 · NIGMS · DUKE UNIVERSITY · PI Christopher V. Nicchitta · 2021 to 2026
$4.1M
Live cell widefield fluorescence microscope with activation and bleaching lasersS10RR027528 · NCRR · DUKE UNIVERSITY · PI JOHNSON, SAM · 2010 to 2010
$423k
Mechanisms and regulation of localized mRNA translationF32GM139254 · NIGMS · DUKE UNIVERSITY · PI HANNIGAN, MOLLY MARIE · 2020 to 2021
$124k
NCRR NIH HHS S10 RR027528NIGMS NIH HHS F32 GM139254NIGMS NIH HHS R35 GM139480
6 · The paper itself

Abstract

Signal recognition particle (SRP) pathway function in protein translocation across the endoplasmic reticulum (ER) is well established; its role in RNA localization to the ER remains, however, unclear. In current models, mRNAs undergo translation- and SRP-dependent trafficking to the ER, with ER localization mediated via interactions between SRP-bound translating ribosomes and the ER-resident SRP receptor (SR), a heterodimeric complex comprising SRA, the SRP-binding subunit, and SRB, an integral membrane ER protein. To study SRP pathway function in RNA localization, SR knockout (KO) mammalian cell lines were generated and the consequences of SR KO on steady-state and dynamic mRNA localization examined. CRISPR/Cas9-mediated

Indexed as

Endoplasmic ReticulumSignal Recognition ParticleAnimalsCytosolMammalsMembrane ProteinsRibosomesRNA, MessengerMembrane ProteinsRNA, MessengerSignal Recognition Particleendoplasmic reticulummRNAribosomeRNA localizationSRP receptor

Identifiers

PMID37643813
PMCPMC10578483
OpenAlexW4386266273

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.