Evidence map›Paper›PMID 37641865›Full record

ArticleThe EMBO journal2023

Global histone H2B degradation regulates insulin/IGF signaling-mediated nutrient stress.

Zhiwen Zhu, Dongdong Li, Zeran Jia, Wenhao Zhang, Yuling Chen, Ruixue Zhao, Yan-Ping Zhang, Wen-Hong Zhang, Haiteng Deng, Yinqing Li and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. microPublication biology · 2026
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  5. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Zhiwen ZhuTsinghua-Peking Center for Life Sciences, Tsinghua University, Beijing, China.
Dongdong LiTsinghua-Peking Center for Life Sciences, Tsinghua University, Beijing, China.ORCID 0000-0003-2515-1115
Zeran JiaIDG/McGovern Institute for Brain Research, Tsinghua University, Beijing, China.
Wenhao ZhangSchool of Life Sciences, Tsinghua University, Beijing, China.
Yuling ChenSchool of Life Sciences, Tsinghua University, Beijing, China.
Ruixue ZhaoTsinghua-Peking Center for Life Sciences, Tsinghua University, Beijing, China.ORCID 0000-0001-9333-1287
Yan-Ping ZhangNational Institute of Biological Science, Beijing, China.
Wen-Hong ZhangNational Institute of Biological Science, Beijing, China.
Haiteng DengSchool of Life Sciences, Tsinghua University, Beijing, China.ORCID 0000-0001-9496-1280
Yinqing LiIDG/McGovern Institute for Brain Research, Tsinghua University, Beijing, China.
Wei LiSchool of Medicine, Tsinghua University, Beijing, China.
Shouhong GuangSchool of Life Sciences, University of Science and Technology of China, Hefei, China.ORCID 0000-0001-7700-9634
Guangshuo OuTsinghua-Peking Center for Life Sciences, Tsinghua University, Beijing, China.ORCID 0000-0003-1512-7824
Chinese Institute for Brain Research · CNNational Institute of Biological Sciences, Beijing · CNTsinghua University · CNUniversity of Science and Technology of China · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Eukaryotic organisms adapt to environmental fluctuations by altering their epigenomic landscapes and transcriptional programs. Nucleosomal histones carry vital epigenetic information and regulate gene expression, yet the mechanisms underlying chromatin-bound histone exchange remain elusive. Here, we found that histone H2Bs are globally degraded in Caenorhabditis elegans during starvation. Our genetic screens identified mutations in ubiquitin and ubiquitin-related enzymes that block H2B degradation in starved animals, identifying lysine 31 as the crucial residue for chromatin-bound H2B ubiquitination and elimination. Retention of aberrant nucleosomal H2B increased the association of the FOXO transcription factor DAF-16 with chromatin, generating an ectopic gene expression profile detrimental to animal viability when insulin/IGF signaling was reduced in well-fed animals. Furthermore, we show that the ubiquitin-proteasome system regulates chromosomal histone turnover in human cells. During larval development, C. elegans epidermal cells undergo H2B turnover after fusing with the epithelial syncytium. Thus, histone degradation may be a widespread mechanism governing dynamic changes of the epigenome.

Indexed as

Caenorhabditis elegansHistonesAnimalsChromatinHumansInsulinUbiquitinUbiquitinationChromatinHistonesInsulinUbiquitinHistone degradationInsulin/IGF signalingUbiquitination

Identifiers

PMID37641865
PMCPMC10548168
OpenAlexW4386253877

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.