Evidence map›Paper›PMID 37639624›Full record

ArticleJournal of the American Medical Informatics Association : JAMIA2023

A method to automate the discharge summary hospital course for neurology patients.

Vince C Hartman, Sanika S Bapat, Mark G Weiner, Babak B Navi, Evan T Sholle, Thomas R Campion

Abstract read
In one paragraph

Article in Journal of the American Medical Informatics Association : JAMIA, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 2 syntheses or guidelines pooled it.

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  17. A dataset and benchmark for hospital course summarization with adapted large language models.Journal of the American Medical Informatics Association : JAMIA · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Vince C HartmanCornell Tech, New York, NY 10044, United States.ORCID 0000-0001-7793-6331
Sanika S BapatCornell Tech, New York, NY 10044, United States.
Mark G WeinerDepartment of Medicine, Weill Cornell Medicine, New York, NY 10065, United States.ORCID 0000-0001-5586-9940
Babak B NaviDepartment of Neurology and Feil Family Brain and Mind Research Institute, Weill Cornell Medicine, New York, NY 10065, United States.
Evan T SholleDepartment of Population Health, Weill Cornell Medicine, New York, NY 10065, United States.ORCID 0000-0001-9518-4399
Thomas R CampionDepartment of Population Health, Weill Cornell Medicine, New York, NY 10065, United States.ORCID 0000-0001-7624-769X

Funding

Clinical and Translational Science AwardUL1TR001873 · NCATS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI REILLY, MUREDACH P · 2016 to 2025
$99.0M
Disparities in COVID Disease Severity and Outcomes in New York CityUL1TR002384 · NCATS · WEILL MEDICAL COLL OF CORNELL UNIV · PI JULIANNE L IMPERATO-MCGINLEY · 2017 to 2026
$86.2M
NCATS NIH HHS UL1 TR001873NCATS NIH HHS UL1 TR002384
6 · The paper itself

Abstract

objectiveGeneration of automated clinical notes has been posited as a strategy to mitigate physician burnout. In particular, an automated narrative summary of a patient's hospital stay could supplement the hospital course section of the discharge summary that inpatient physicians document in electronic health record (EHR) systems. In the current study, we developed and evaluated an automated method for summarizing the hospital course section using encoder-decoder sequence-to-sequence transformer models. MATERIALS AND

methodsWe fine-tuned BERT and BART models and optimized for factuality through constraining beam search, which we trained and tested using EHR data from patients admitted to the neurology unit of an academic medical center.

resultsThe approach demonstrated good ROUGE scores with an R-2 of 13.76. In a blind evaluation, 2 board-certified physicians rated 62% of the automated summaries as meeting the standard of care, which suggests the method may be useful clinically. DISCUSSION AND

conclusionTo our knowledge, this study is among the first to demonstrate an automated method for generating a discharge summary hospital course that approaches a quality level of what a physician would write.

Indexed as

Electronic Health RecordsPatient DischargeHospitalsHumansInpatientsSoftwareabstractive summarizationautomated clinical notesautomated patient summaryclinician burnoutmachine learningnatural language processing

Identifiers

PMID37639624
PMCPMC10654848

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.