Evidence map›Paper›PMID 37639392›Full record

ArticlePloS one2023

Critical evaluation of kinetic schemes for coagulation.

Alexandre Ranc, Salome Bru, Simon Mendez, Muriel Giansily-Blaizot, Franck Nicoud, Rodrigo Méndez Rojano

Abstract read
In one paragraph

Article in PloS one, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Alexandre RancDepartment of Haematology Biology, CHU, Univ Montpellier, Montpellier, France.
Salome BruPolytech, Univ Montpellier, Montpellier, France.
Simon MendezIMAG, Univ Montpellier, CNRS, Montpellier, France.
Muriel Giansily-BlaizotDepartment of Haematology Biology, CHU, Univ Montpellier, Montpellier, France.
Franck NicoudIMAG, Univ Montpellier, CNRS, Montpellier, France.
Rodrigo Méndez RojanoIMAG, Univ Montpellier, CNRS, Montpellier, France.ORCID 0000-0001-6190-1628

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Two well-established numerical representations of the coagulation cascade either initiated by the intrinsic system (Chatterjee et al., PLOS Computational Biology 2010) or the extrinsic system (Butenas et al., Journal of Biological Chemistry, 2004) were compared with thrombin generation assays under realistic pathological conditions. Biochemical modifications such as the omission of reactions not relevant to the case studied, the modification of reactions related to factor XI activation and auto-activation, the adaptation of initial conditions to the thrombin assay system, and the adjustment of some of the model parameters were necessary to align in vitro and in silico data. The modified models are able to reproduce thrombin generation for a range of factor XII, XI, and VIII deficiencies, with the coagulation cascade initiated either extrinsically or intrinsically. The results emphasize that when existing models are extrapolated to experimental parameters for which they have not been calibrated, careful adjustments are required.

Indexed as

AcclimatizationThrombinBiological AssayBlood CoagulationComputational BiologyThrombin

Identifiers

PMID37639392
PMCPMC10461854

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.