Evidence map›Paper›PMID 37639153›Full record

ArticleMolecular biology reports2023

Epithelial-to-mesenchymal transition status correlated with ultrastructural features, and TP53 mutation in patient-derived oral cancer cell lines.

Sushant S Navarange, Sanjay M Bane, Darshan Mehta, Sanket Shah, Sanjay Gupta, Sanjeev K Waghmare

Abstract read
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In one paragraph

Article in Molecular biology reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Sushant S NavarangeWaghmare Lab, Stem Cell Biology Group, Advanced Centre for Treatment Research and Education in Cancer (ACTREC), Tata Memorial Centre, Cancer Research Institute, Navi Mumbai, 410210, India.
Sanjay M BaneWaghmare Lab, Stem Cell Biology Group, Advanced Centre for Treatment Research and Education in Cancer (ACTREC), Tata Memorial Centre, Cancer Research Institute, Navi Mumbai, 410210, India.
Darshan MehtaWaghmare Lab, Stem Cell Biology Group, Advanced Centre for Treatment Research and Education in Cancer (ACTREC), Tata Memorial Centre, Cancer Research Institute, Navi Mumbai, 410210, India.
Sanket ShahGupta Lab, Epigenetics and chromatin Biology Group, Advanced Centre for Treatment Research and Education in Cancer (ACTREC), Tata Memorial Centre, Cancer Research Institute, Navi Mumbai, 410210, India.
Sanjay GuptaGupta Lab, Epigenetics and chromatin Biology Group, Advanced Centre for Treatment Research and Education in Cancer (ACTREC), Tata Memorial Centre, Cancer Research Institute, Navi Mumbai, 410210, India.
Sanjeev K WaghmareWaghmare Lab, Stem Cell Biology Group, Advanced Centre for Treatment Research and Education in Cancer (ACTREC), Tata Memorial Centre, Cancer Research Institute, Navi Mumbai, 410210, India. swaghmare@actrec.gov.in.ORCID http://orcid.org/0000-0002-3693-5620
Homi Bhabha National Institute · INTata Memorial Hospital · IN

Funding

Advanced Centre for Treatment, Research and Education in Cancer 3542Council for Scientific and Industrial Research,India 09/513
6 · The paper itself

Abstract

backgroundOral Squamous Cell Carcinoma (OSCC) is a highly prevalent cancer in the Indian subcontinent. The major cause of mortality in OSCC patients is metastasis. Epithelial-to-mesenchymal transition (EMT) marks an important step in the metastatic process. Additionally, TP53, an important tumor suppressor gene, is also a significant determinant of the treatment outcome, and also plays a role in EMT. Therefore, understanding the interconnections between ultrastructural features, EMT status and TP53 mutational status is of vital importance. METHODS AND

resultsThe ultrastructure of five OSCC cell lines was visualized by transmission electron microscopy. Trans-well invasion and migration assays as well as scratch-wound assay, and the expression of various EMT-related genes were utilized to assess the EMT status of the cell lines. The TP53 exons were amplified for the ACOSC3, ACOSC4 and ACOSC16 cell lines and sequenced and the mutations in the gene were identified by sequence alignment. The TP53 mutation in the UPCI:SCC029B cell line has been previously reported, while UPCI:SCC040 has been reported to harbor a wild type TP53. The ACOSC4 cell line which showed the shortest intercellular gaps, also had the least invasive and migratory potential. Interestingly, ACOSC4 showed the highest expression of E-cadherin and the lowest expression of Vimentin, TWIST1, ZEB1, and MMPs. Additionally, TP53 gene of ACOSC4 was unmutated, whereas the ACOSC3 and ACOSC16 harbored TP53 mutations. The mutation in ACOSC3 (R196*) was also found in 7 TCGA samples. Similarly, the UPCI:SCC040 cell line that harbors a wild type TP53 showed shorter intracellular gaps.

conclusionsCellular migratory properties are associated with cellular ultrastructure, epithelial-to-mesenchymal transition status and the status of TP53 mutation in the genome.

Indexed as

Carcinoma, Squamous CellHead and Neck NeoplasmsMouth NeoplasmsCell LineEpithelial-Mesenchymal TransitionHumansSquamous Cell Carcinoma of Head and NeckTumor Suppressor Protein p53TP53 protein, humanTumor Suppressor Protein p53Cellular invasionCellular migrationEpithelial-to-mesenchymal transitionOral cancerTP53 mutationUltrastructure

Identifiers

PMID37639153
OpenAlexW4386209754

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.