Evidence map›Paper›PMID 37638806›Full record

ArticleJournal of enzyme inhibition and medicinal chemistry2023

The hope and hype of ellagic acid and urolithins as ligands of SARS-CoV-2 Nsp5 and inhibitors of viral replication.

Elisa Bianconi, Anna Gidari, Maria Souma, Samuele Sabbatini, Deborah Grifagni, Carlo Bigiotti, Elisabetta Schiaroli, Lucia Comez, Alessandro Paciaroni, Francesca Cantini and 2 more

Open access · goldAbstract read
In one paragraph

Article in Journal of enzyme inhibition and medicinal chemistry, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Elisa BianconiDepartment of Pharmaceutical Sciences, University of Perugia, Perugia, Italy.
Anna GidariDepartment of Medicine and Surgery, Clinic of Infectious Diseases, University of Perugia, Perugia, Italy.
Maria SoumaDepartment of Pharmaceutical Sciences, University of Perugia, Perugia, Italy.
Samuele SabbatiniMedical Microbiology Section, Department of Medicine and Surgery, University of Perugia, Perugia, Italy.
Deborah GrifagniCentre for Magnetic Resonance, University of Florence, Sesto Fiorentino, Italy.
Carlo BigiottiDepartment of Pharmaceutical Sciences, University of Perugia, Perugia, Italy.
Elisabetta SchiaroliDepartment of Medicine and Surgery, Clinic of Infectious Diseases, University of Perugia, Perugia, Italy.
Lucia ComezIstituto Officina dei Materiali-IOM, National Research Council-CNR, Perugia, Italy.
Alessandro PaciaroniDepartment of Physics and Geology, University of Perugia, Perugia, Italy.
Francesca CantiniCentre for Magnetic Resonance, University of Florence, Sesto Fiorentino, Italy.
Daniela FrancisciDepartment of Medicine and Surgery, Clinic of Infectious Diseases, University of Perugia, Perugia, Italy.
Antonio MacchiaruloDepartment of Pharmaceutical Sciences, University of Perugia, Perugia, Italy.
University of Perugia · ITIstituto Officina dei Materiali · ITResonance Research (United States) · USUniversity of Florence · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Non-structural protein 5 (Nsp5) is a cysteine protease that plays a key role in SARS-CoV-2 replication, suppressing host protein synthesis and promoting immune evasion. The investigation of natural products as a potential strategy for Nsp5 inhibition is gaining attention as a means of developing antiviral agents. In this work, we have investigated the physicochemical properties and structure-activity relationships of ellagic acid and its gut metabolites, urolithins A-D, as ligands of Nsp5. Results allow us to identify urolithin D as promising ligand of Nsp5, with a dissociation constant in the nanomolar range of potency. Although urolithin D is able to bind to the catalytic cleft of Nsp5, the appraisal of its viral replication inhibition against SARS-CoV-2 in Vero E6 assay highlights a lack of activity. While these results are discussed in the framework of the available literature reporting conflicting data on polyphenol antiviral activity, they provide new clues for natural products as potential viral protease inhibitors.

Indexed as

Antiviral AgentsBiological ProductsEllagic AcidSARS-CoV-2Virus ReplicationHeterocyclic CompoundsLigandsAntiviral AgentsBiological ProductsEllagic AcidHeterocyclic CompoundsLigandsAntiviralmicroscale thermophoresispolyphenolsurolithins

Identifiers

PMID37638806
PMCPMC10464554
OpenAlexW4386209605

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.