Evidence map›Paper›PMID 37637732›Full record

ArticleACS central science2023

Hydrogel-Encapsulated Beads Enable Proximity-Driven Encoded Library Synthesis and Screening.

Valerie Cavett, Alix I Chan, Christian N Cunningham, Brian M Paegel

Abstract read
In one paragraph

Article in ACS central science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Amplicon/Protein Bead Display enables quantitativebioRxiv : the preprint server for biology · 2026
    Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Valerie CavettDepartment of Pharmaceutical Sciences, University of California, Irvine, California 92697, United States.ORCID https://orcid.org/0000-0003-2859-6355
Alix I ChanDepartment of Peptide Therapeutics, Genentech, South San Francisco, California 94080, United States.ORCID https://orcid.org/0000-0002-2698-4031
Christian N CunninghamDepartment of Peptide Therapeutics, Genentech, South San Francisco, California 94080, United States.ORCID https://orcid.org/0000-0003-3993-660X
Brian M PaegelDepartment of Pharmaceutical Sciences, University of California, Irvine, California 92697, United States.ORCID https://orcid.org/0000-0002-6531-6693

Funding

Activity-Based DNA-Encoded Library TechnologyR35GM140890 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI Brian M Paegel · 2021 to 2026
$2.2M
NIGMS NIH HHS R35 GM140890
6 · The paper itself

Abstract

Encoded combinatorial library technologies have dramatically expanded the chemical space for screening but are usually only analyzed by affinity selection binding. It would be highly advantageous to reformat selection outputs to "one-bead-one-compound" solid-phase libraries, unlocking activity-based and cellular screening capabilities. Here, we describe hydrogel-encapsulated magnetic beads that enable such a transformation. Bulk emulsion polymerization of polyacrylamide hydrogel shells around magnetic microbeads yielded uniform particles (7 ± 2 μm diameter) that are compatible with diverse in-gel functionalization (amine, alkyne, oligonucleotides) and transformations associated with DNA-encoded library synthesis (acylation, enzymatic DNA ligation). In a case study of reformatting mRNA display libraries, transcription from DNA-templated magnetic beads encapsulated in gel particles colocalized both RNA synthesis via hybridization with copolymerized complementary DNA and translation via puromycin labeling. Two control epitope templates (V5, HA) were successfully enriched (50- and 99-fold, respectively) from an NNK

Identifiers

PMID37637732
PMCPMC10451030

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.