Evidence map›Paper›PMID 37637234›Full record

ArticleJournal of immunotherapy and precision oncology2023

Autoimmune HLA Alleles and Neoepitope Presentation Predict Post-Allogenic Transplant Relapse.

Andrea Castro, Aaron M Goodman, Zachary Rane, James V Talwar, Garrett M Frampton, Gerald P Morris, Scott M Lippman, Xinlian Zhang, Razelle Kurzrock, Hannah Carter

Open access · goldAbstract read
In one paragraph

Article in Journal of immunotherapy and precision oncology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Andrea CastroBioinformatics and Systems Biology Program, University of California San Diego, La Jolla, CA, USA.ORCID https://orcid.org/0000-0002-5873-2496
Aaron M GoodmanDivision of Blood and Marrow Transplantation, Department of Medicine, University of California San Diego, La Jolla, CA, USA.
Zachary RaneSchool of Medicine, University of California San Diego, La Jolla, CA, USA.
James V TalwarBioinformatics and Systems Biology Program, University of California San Diego, La Jolla, CA, USA.
Garrett M FramptonFoundation Medicine, Cambridge, MA, USA.
Gerald P MorrisDepartment of Pathology, University of California San Diego, La Jolla, CA, USA.
Scott M LippmanSchool of Medicine, University of California San Diego, La Jolla, CA, USA.
Xinlian ZhangDivision of Biostatistics and Bioinformatics, Herbert Wertheim School of Public Health, University of California San Diego, La Jolla, CA, USA.
Razelle KurzrockDepartment of Medicine, Medical College of Wisconsin, Milwaukee, WI, USA.
Hannah CarterDivision of Medical Genetics, Department of Medicine, University of California San Diego, La Jolla, CA, USA.ORCID https://orcid.org/0000-0002-1729-2463
University of California San Diego · USFoundation Medicine (United States)Medical College of Wisconsin · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Allogeneic hematopoietic stem cell transplantation (allo-HSCT) can cure patients with high-risk myelodysplastic syndromes (MDS) and acute myeloid leukemia (AML). However, many patients relapse or develop debilitating graft-versus-host disease. Transplant restores T-cell reactivity against tumor cells, implicating patient human leukocyte antigen (HLA)-dependent antigen presentation via the major histocompatibility complex as a determinant of response. We sought to identify characteristics of the HLA genotype that influence response in allo-HSCT patients. Methods: We collected HLA genotype and panel-based somatic mutation profiles for 55 patients with AML and MDS and available data treated at the University of California San Diego Moores Cancer Center between May 2012 and January 2019. We evaluated characteristics of the HLA genotype relative to relapse-free time and overall survival (OS) post-allo-HSCT using univariable and multivariable regression. Results: In multivariable regression, the presence of an autoimmune allele was significantly associated with relapse-free time (hazard ratio [HR], 0.25; Conclusion: In this single institution retrospective study of patients receiving allo-HSCT for relapsed AML/MDS, characteristics of an individual's HLA genotype (presence of an autoimmune allele and potential of the donor HLA to better present peptides representing driver mutations) were significantly associated with better outcomes. These findings suggest that HLA type may guide the optimal application of allo-HSCT and merit evaluation in larger cohorts.

Indexed as

acute myeloid leukemiaallo-HSCTHLA genotypeneoantigenrelapse

Identifiers

PMID37637234
PMCPMC10448732
OpenAlexW4376959759

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.