Evidence map›Paper›PMID 37636398›Full record

ArticleHeliyon2023

The metabolic adaptation of bile acids and cholesterol after biliary atresia in lamprey via transcriptome-based analysis.

Qipeng Zhang, Jilong Pan, Yingying Zhu, Jindi Liu, Yue Pang, Jiarui Li, Pengju Han, Meng Gou, Jun Li, Peng Su and 2 more

Open access · goldAbstract read
In one paragraph

Article in Heliyon, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 76% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Qipeng ZhangCollege of Life Sciences, Liaoning Normal University, Dalian, 116081, China.
Jilong PanCollege of Life Sciences, Liaoning Normal University, Dalian, 116081, China.
Yingying ZhuCollege of Life Sciences, Liaoning Normal University, Dalian, 116081, China.
Jindi LiuCollege of Life Sciences, Liaoning Normal University, Dalian, 116081, China.
Yue PangCollege of Life Sciences, Liaoning Normal University, Dalian, 116081, China.
Jiarui LiCollege of Life Sciences, Liaoning Normal University, Dalian, 116081, China.
Pengju HanCollege of Life Sciences, Sichuan University, Sichuan, China.
Meng GouCollege of Life Sciences, Liaoning Normal University, Dalian, 116081, China.
Jun LiCollege of Life Sciences, Liaoning Normal University, Dalian, 116081, China.
Peng SuCollege of Life Sciences, Liaoning Normal University, Dalian, 116081, China.
Qingwei LiCollege of Life Sciences, Liaoning Normal University, Dalian, 116081, China.
Yan ChiCollege of Life Sciences, Liaoning Normal University, Dalian, 116081, China.
Liaoning Normal University · CNSichuan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lamprey underwent biliary atresia (BA) at its metamorphosis stage. In contrast to patients with BA who develop progressive disease, lamprey can grow and develop normally, suggesting that lamprey has several adaptations for BA. Here we show that adaptive changes in bile acid and cholesterol metabolism are produced after lamprey BA. Among 1102 differentially expressed genes (DGEs) after BA in lamprey, many are enriched in gene ontology (GO) terms and pathways related to steroid metabolism. We find that among the DGEs related to bile acids and cholesterol metabolism, the expression of cytochrome P450 family 7 subfamily A member 1 (CYP7A1), sodium-dependent taurine cotransport polypeptide (NTCP) are significantly downregulated, whereas nuclear receptor farnesoid X receptor (FXR), multidrug resistance-associated protein 3 (MRP3), 3-hydroxy-3-methylglutaryl-CoA reductase (HMGCR), sterol O-acyltransferase 1 (SOAT1), and ATP binding cassette subfamily A member 1 (ABCA1) are remarkably upregulated. The changes in expression level are also validated by RT-qPCR. Furthermore, the level of high-density lipoprotein-cholesterol (HDL-C) and low-density lipoprotein-cholesterol (LDL-C) in juvenile serum is higher compared to larvae. Taken together, the findings collectively indicate that after BA, lamprey may maintain bile acids and cholesterol homeostasis in liver tissue by inhibiting bile acids synthesis and uptake, promoting its efflux back to circulation, and enhancing cholesterol esterification for storage as lipid droplets and its egress to form nascent HDL (nHDL). Understanding the possible molecular mechanisms of lamprey metabolic adaptation sheds new light on the understanding of the development and treatment of diseases caused by abnormal bile acid and cholesterol metabolism in humans.

Indexed as

Bile acids and cholesterol metabolismBiliary atresiaLampreyMetabolic adaptation

Identifiers

PMID37636398
PMCPMC10450982
OpenAlexW4385803740

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.