Evidence map›Paper›PMID 37636110›Full record

ArticleFrontiers in plant science2023

Functional characterization and allelic mining of

Wei Zeng, Hua Li, Fanlin Zhang, Xinchen Wang, Shamsur Rehman, Shiji Huang, Chenyang Zhang, Fengcai Wu, Jianfeng Li, Yamei Lv and 4 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
3.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Genome-wide identification of riceFrontiers in plant science · 2024
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Wei ZengSchool of Agronomy, Anhui Agricultural University, Hefei, China.
Hua LiSchool of Agronomy, Anhui Agricultural University, Hefei, China.
Fanlin ZhangSchool of Agronomy, Anhui Agricultural University, Hefei, China.
Xinchen WangSchool of Agronomy, Anhui Agricultural University, Hefei, China.
Shamsur RehmanPeking University Institute of Advanced Agricultural Sciences, Shandong Laboratory of Advanced Agriculture Sciences in Weifang, Weifang, China.
Shiji HuangSchool of Agronomy, Anhui Agricultural University, Hefei, China.
Chenyang ZhangSchool of Agronomy, Anhui Agricultural University, Hefei, China.
Fengcai WuSchool of Agronomy, Anhui Agricultural University, Hefei, China.
Jianfeng LiSchool of Agronomy, Anhui Agricultural University, Hefei, China.
Yamei LvSchool of Agronomy, Anhui Agricultural University, Hefei, China.
Chaopu ZhangSchool of Agronomy, Anhui Agricultural University, Hefei, China.
Min LiSchool of Agronomy, Anhui Agricultural University, Hefei, China.
Zhikang LiSchool of Agronomy, Anhui Agricultural University, Hefei, China.
Yingyao ShiSchool of Agronomy, Anhui Agricultural University, Hefei, China.
Anhui Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glutamate-like receptor (GLR) genes are a group of regulatory genes involved in many physiological processes of plants. With 26 members in the rice genome, the functionalities of most rice GLR genes remain unknown. To facilitate their potential uses in rice improvement, an integrated strategy involving CRISPR-Cas9 mediated knockouts, deep mining and analyses of transcriptomic responses to different abiotic stresses/hormone treatments and gene CDS haplotype (gcHap) diversity in 3,010 rice genomes was taken to understand the functionalities of the 26 rice GLR genes, which led us to two conclusions. First, the expansion of rice GLR genes into a large gene family during evolution had gone through repeated gene duplication events occurred primarily in two large GLR gene clusters on rice chromosomes 9 and 6, which was accompanied with considerable functional differentiation. Secondly, except for two extremely conserved ones (

Indexed as

functional allelesgene-CDS-haplotype (gcHap) diversityglutamate-like receptor (GLR) genesknockout mutantsrice improvement

Identifiers

PMID37636110
PMCPMC10450912
OpenAlexW4385758940

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.