Evidence map›Paper›PMID 37631986›Full record

ArticleViruses2023

Discovery and Analyses of Caulimovirid-like Sequences in Upland Cotton (

Nina Aboughanem-Sabanadzovic, Thomas W Allen, James Frelichowski, Jodi Scheffler, Sead Sabanadzovic

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Viruses, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 5 institutions in 1 country.

Nina Aboughanem-SabanadzovicInstitute for Genomics, Biocomputing and Biotechnology, Mississippi State University, 2 Research Park, Mailstop 9627, Mississippi, MS 39762, USA.ORCID 0000-0002-6141-3218
Thomas W AllenDelta Research and Extension Center, Mississippi State University, 82 Stoneville Road, P.O. Box 197, Stoneville, MS 38776, USA.ORCID 0000-0003-2828-3420
James FrelichowskiUSDA-ARS Plains Area, 2881 F&B Road, College Station, TX 77845, USA.ORCID 0000-0002-9501-7491
Jodi SchefflerUSDA-ARS Mid-South Area, 141 Experiment Station Road, Stoneville, MS 38776, USA.ORCID 0000-0001-7897-2916
Sead SabanadzovicDepartment of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, 100 Twelve Lane, Mail Stop 9775, Mississippi, MS 39762, USA.ORCID 0000-0002-2995-2633
Agricultural Research Service · USBiocom · USDelta Air Lines (United States) · USMississippi State University · USSouthern Plains Agricultural Research Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Analyses of Illumina-based high-throughput sequencing data generated during characterization of the cotton leafroll dwarf virus population in Mississippi (2020-2022) consistently yielded contigs varying in size (most frequently from 4 to 7 kb) with identical nucleotide content and sharing similarities with reverse transcriptases (RTases) encoded by extant plant pararetroviruses (family

Indexed as

Computational BiologyGossypiumHigh-Throughput Nucleotide SequencingMovementPhylogenyCaulimoviridaecottonendogenous formepisomal formgenome integrationpararetrovirusvirus

Identifiers

PMID37631986
PMCPMC10458927
OpenAlexW4385349834

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.