Evidence map›Paper›PMID 37630603›Full record

ArticleMicroorganisms2023

Exploring Long-Read Metagenomics for Full Characterization of Shiga Toxin-Producing

Sandra Jaudou, Carlus Deneke, Mai-Lan Tran, Carina Salzinger, Fabien Vorimore, André Goehler, Elisabeth Schuh, Burkhard Malorny, Patrick Fach, Josephine Grützke and 1 more

Abstract read
In one paragraph

Article in Microorganisms, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Sandra JaudouCOLiPATH Unit, Laboratory for Food Safety, ANSES, 94700 Maisons-Alfort, France.ORCID 0000-0003-0963-6729
Carlus DenekeNational Study Center for Sequencing in Risk Assessment, Department of Biological Safety, German Federal Institute for Risk Assessment, 12277 Berlin, Germany.
Mai-Lan TranCOLiPATH Unit, Laboratory for Food Safety, ANSES, 94700 Maisons-Alfort, France.
Carina SalzingerNational Reference Laboratory for Escherichia coli Including VTEC, Department of Biological Safety, German Federal Institute for Risk Assessment, 12277 Berlin, Germany.
Fabien VorimoreGenomics Platform IdentyPath, Laboratory for Food Safety, ANSES, 94700 Maisons-Alfort, France.ORCID 0000-0001-7678-5551
André GoehlerNational Reference Laboratory for Escherichia coli Including VTEC, Department of Biological Safety, German Federal Institute for Risk Assessment, 12277 Berlin, Germany.ORCID 0000-0002-4006-3511
Elisabeth SchuhNational Reference Laboratory for Escherichia coli Including VTEC, Department of Biological Safety, German Federal Institute for Risk Assessment, 12277 Berlin, Germany.
Burkhard MalornyNational Study Center for Sequencing in Risk Assessment, Department of Biological Safety, German Federal Institute for Risk Assessment, 12277 Berlin, Germany.ORCID 0000-0002-3363-8225
Patrick FachCOLiPATH Unit, Laboratory for Food Safety, ANSES, 94700 Maisons-Alfort, France.
Josephine GrützkeNational Study Center for Sequencing in Risk Assessment, Department of Biological Safety, German Federal Institute for Risk Assessment, 12277 Berlin, Germany.
Sabine DelannoyCOLiPATH Unit, Laboratory for Food Safety, ANSES, 94700 Maisons-Alfort, France.ORCID 0000-0002-9208-5659

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The characterization of Shiga toxin-producing

Indexed as

isolation-free characterizationlong-read sequencingmetagenomicsmilkSTEC

Identifiers

PMID37630603
PMCPMC10458860

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.