Evidence map›Paper›PMID 37630561›Full record

ArticleMicroorganisms2023

Individual and Group-Based Effects of In Vitro Fiber Interventions on the Fecal Microbiota.

Valeria Agamennone, Tim J van den Broek, Alie de Kat Angelino-Bart, Femke P M Hoevenaars, Jan Willem van der Kamp, Frank H J Schuren

Open access · goldAbstract read
In one paragraph

Article in Microorganisms, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. TranslatingFrontiers in microbiology · 2025
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Valeria AgamennoneMicrobiology and Systems Biology Group, TNO, 2333 BE Leiden, The Netherlands.ORCID 0000-0002-0572-6068
Tim J van den BroekMicrobiology and Systems Biology Group, TNO, 2333 BE Leiden, The Netherlands.
Alie de Kat Angelino-BartMicrobiology and Systems Biology Group, TNO, 2333 BE Leiden, The Netherlands.
Femke P M HoevenaarsMicrobiology and Systems Biology Group, TNO, 2333 BE Leiden, The Netherlands.
Jan Willem van der KampMicrobiology and Systems Biology Group, TNO, 2333 BE Leiden, The Netherlands.ORCID 0000-0002-1823-8119
Frank H J SchurenMicrobiology and Systems Biology Group, TNO, 2333 BE Leiden, The Netherlands.ORCID 0000-0001-6982-5340

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The development of microbiome-targeted strategies is limited by individual differences in gut microbiome composition and metabolic responses to interventions. In vitro models that can replicate this variation allow us to conduct pre-clinical studies and assess efficacy. This study describes the exposure of 16 individual fecal microbiota samples to 5 different fibers using an in vitro system for the anaerobic cultivation of bacteria. The individual microbiota differed in composition and metabolite profiles (short-chain fatty acids and branched-chain fatty acids) after incubation with the fibers. Furthermore, microbiota composition after fiber incubation was significantly different between subjects with good intestinal health and subjects with Inflammatory Bowel Disease (IBD). α-diversity was differently affected by dietary fibers; for example, exposure to psyllium resulted in increased diversity in the healthy group and in decreased diversity in the IBD group. Instead, the functional metabolic profile did not differ between the two groups. Finally, the combination of all fibers, tested on the microbiota from IBD subjects, resulted in stronger overall effects on both microbiota composition and metabolite production compared to the single fibers. These results confirm that incubation with dietary fiber results in different compositional and functional effects on individual microbiota and that in vitro models represent successful tools for studying individual fiber effects.

Indexed as

dietary fiberindividual microbiotainflammatory bowel diseasein vitro modelSCFA

Identifiers

PMID37630561
PMCPMC10459671
OpenAlexW4385543522

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.