Evidence map›Paper›PMID 37630332›Full record

ArticleMolecules (Basel, Switzerland)2023

Binding Specificity of a Novel Cyclo/Maltodextrin-Binding Protein and Its Role in the Cyclodextrin ABC Importer System from Thermoanaerobacterales.

Jorge Aranda-Caraballo, Roberto A Saenz, Alonso A López-Zavala, Beatriz Velazquez-Cruz, Laura Espinosa-Barrera, Yair Cárdenas-Conejo, Andrés Zárate-Romero, Oscar Linares-Vergara, Juan A Osuna-Castro, Edgar Bonales-Alatorre and 2 more

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.3field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Jorge Aranda-CaraballoLaboratorio de Biología Sintética, Estructural y Molecular, Universidad de Colima, Carretera Los Limones-Loma de Juárez, Colima 28627, Mexico.
Roberto A SaenzFacultad de Ciencias, Universidad de Colima, Bernal Díaz del Castillo 340, Colima 28045, Mexico.ORCID 0000-0002-0723-2539
Alonso A López-ZavalaDepartamento de Ciencias Químico-Biológicas, Universidad de Sonora, Hermosillo 83000, Mexico.ORCID 0000-0001-9843-3709
Beatriz Velazquez-CruzLaboratorio de Biología Sintética, Estructural y Molecular, Universidad de Colima, Carretera Los Limones-Loma de Juárez, Colima 28627, Mexico.ORCID 0009-0004-9194-0184
Laura Espinosa-BarreraLaboratorio de Biología Sintética, Estructural y Molecular, Universidad de Colima, Carretera Los Limones-Loma de Juárez, Colima 28627, Mexico.
Yair Cárdenas-ConejoConsejo Nacional de Humanidades, Ciencias y Tecnologías, Laboratorio de Biología Sintética, Estructural y Molecular, Universidad de Colima, Carretera Los Limones-Loma de Juárez, Colima 28627, Mexico.
Andrés Zárate-RomeroConsejo Nacional de Humanidades, Ciencias y Tecnologías, Centro de Nanociencias y Nanotecnología, Universidad Nacional Autónoma de México, Km 107 CarreteraTijuana-Ensenada, Ensenada 22860, Mexico.ORCID 0000-0002-7723-9250
Oscar Linares-VergaraLaboratorio de Biología Sintética, Estructural y Molecular, Universidad de Colima, Carretera Los Limones-Loma de Juárez, Colima 28627, Mexico.
Juan A Osuna-CastroFacultad de Ciencias Biológicas y Agropecuarias, Universidad de Colima, Autopista Colima-Manzanillo, Tecomán 28100, Mexico.ORCID 0000-0002-4685-5296
Edgar Bonales-AlatorreCentro Universitario de Investigaciones Biomédicas, Universidad de Colima, Avenida 25 de julio 965, Colonia Villa de San Sebastián, Colima 28045, Mexico.ORCID 0000-0001-6003-8850
Sara Centeno-LeijaConsejo Nacional de Humanidades, Ciencias y Tecnologías, Laboratorio de Biología Sintética, Estructural y Molecular, Universidad de Colima, Carretera Los Limones-Loma de Juárez, Colima 28627, Mexico.ORCID 0000-0002-8573-4577
Hugo Serrano-PosadaConsejo Nacional de Humanidades, Ciencias y Tecnologías, Laboratorio de Biología Sintética, Estructural y Molecular, Universidad de Colima, Carretera Los Limones-Loma de Juárez, Colima 28627, Mexico.ORCID 0000-0002-7901-475X
Universidad de Colima · MXUniversidad de Sonora · MXUniversidad Nacional Autónoma de México · MX

Funding

Consejo Nacional de Humanidades, Ciencias y Tecnologías (CONAHCyT) CB-2018-A1-S-18011, CF-2019-33-549477, INFR-2021-17-316456
6 · The paper itself

Abstract

Extracellular synthesis of functional cyclodextrins (CDs) as intermediates of starch assimilation is a convenient microbial adaptation to sequester substrates, increase the half-life of the carbon source, carry bioactive compounds, and alleviate chemical toxicity through the formation of CD-guest complexes. Bacteria encoding the four steps of the carbohydrate metabolism pathway via cyclodextrins (CM-CD) actively internalize CDs across the microbial membrane via a putative type I ATP-dependent ABC sugar importer system, MdxEFG-(X/MsmX). While the first step of the CM-CD pathway encompasses extracellular starch-active cyclomaltodextrin glucanotransferases (CGTases) to synthesize linear dextrins and CDs, it is the ABC importer system in the second step that is the critical factor in determining which molecules from the CGTase activity will be internalized by the cell. Here, structure-function relationship studies of the cyclo⁄maltodextrin-binding protein MdxE of the MdxEFG-MsmX importer system from

Indexed as

Carrier ProteinsDextrinsBacillotaBacteria, AnaerobicPolysaccharidesStarchThermoanaerobacterCarrier ProteinsDextrinsmaltodextrinPolysaccharidesStarchcarbohydrate metabolismCM-CDMdxESBPstarch-converting pathway

Identifiers

PMID37630332
PMCPMC10458862
OpenAlexW4385873561

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.