Evidence map›Paper›PMID 37628759›Full record

ArticleInternational journal of molecular sciences2023

Depletion of

Alzbeta Chabronova, Guus van den Akker, Bas A C Housmans, Marjolein M J Caron, Andy Cremers, Don A M Surtel, Mandy J Peffers, Lodewijk W van Rhijn, Virginie Marchand, Yuri Motorin and 1 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it, 7 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 3 countries.

Alzbeta ChabronovaLaboratory for Experimental Orthopedics, Department of Orthopedic Surgery, Maastricht University, 6229 HX Maastricht, The Netherlands.ORCID 0000-0002-9733-444X
Guus van den AkkerLaboratory for Experimental Orthopedics, Department of Orthopedic Surgery, Maastricht University, 6229 HX Maastricht, The Netherlands.ORCID 0000-0002-7071-1487
Bas A C HousmansLaboratory for Experimental Orthopedics, Department of Orthopedic Surgery, Maastricht University, 6229 HX Maastricht, The Netherlands.
Marjolein M J CaronLaboratory for Experimental Orthopedics, Department of Orthopedic Surgery, Maastricht University, 6229 HX Maastricht, The Netherlands.ORCID 0000-0001-5316-9211
Andy CremersLaboratory for Experimental Orthopedics, Department of Orthopedic Surgery, Maastricht University, 6229 HX Maastricht, The Netherlands.
Don A M SurtelLaboratory for Experimental Orthopedics, Department of Orthopedic Surgery, Maastricht University, 6229 HX Maastricht, The Netherlands.
Mandy J PeffersInstitute of Life Course and Medical Sciences, University of Liverpool, Liverpool L8 7TX, UK.ORCID 0000-0001-6979-0440
Lodewijk W van RhijnLaboratory for Experimental Orthopedics, Department of Orthopedic Surgery, Maastricht University, 6229 HX Maastricht, The Netherlands.
Virginie MarchandUAR2008 IBSLor CNRS-INSERM-Université de Lorraine, F54000 Nancy, France.ORCID 0000-0002-8537-1139
Yuri MotorinUAR2008 IBSLor CNRS-INSERM-Université de Lorraine, F54000 Nancy, France.ORCID 0000-0002-8018-334X
Tim J M WeltingLaboratory for Experimental Orthopedics, Department of Orthopedic Surgery, Maastricht University, 6229 HX Maastricht, The Netherlands.
Maastricht University · NLCentre National de la Recherche Scientifique · FRUniversity of Liverpool · GB

Funding

Medical Research Council MR/P020941/1Reumafonds 17-2-401Reumafonds LLP14Stichting De Weijerhorst Bewegen zonder PijnWellcome TrustWellcome Trust Clinical Intermediate Fellowship 107471/Z/15/Z
6 · The paper itself

Abstract

Eukaryotic ribosomes are complex molecular nanomachines translating genetic information from mRNAs into proteins. There is natural heterogeneity in ribosome composition. The pseudouridylation (ψ) of ribosomal RNAs (rRNAs) is one of the key sources of ribosome heterogeneity. Nevertheless, the functional consequences of ψ-based ribosome heterogeneity and its relevance for human disease are yet to be understood. Using HydraPsiSeq and a chronic disease model of non-osteoarthritic primary human articular chondrocytes exposed to osteoarthritic synovial fluid, we demonstrated that the disease microenvironment is capable of instigating site-specific changes in rRNA ψ profiles. To investigate one of the identified differential rRNA ψ sites (28S-ψ4966), we generated

Indexed as

ProteomeTandem Mass SpectrometryChromatography, LiquidHumansRibosomesRNA Processing, Post-TranscriptionalRNA, RibosomalProteomeRNA, Ribosomal28Schondrocytesepitranscriptomeosteoarthritisribosomal RNAribosome

Identifiers

PMID37628759
PMCPMC10454564
OpenAlexW4385665273

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.