Evidence map›Paper›PMID 37627786›Full record

ArticleBioengineering (Basel, Switzerland)2023

Self-Supervised Learning Application on COVID-19 Chest X-ray Image Classification Using Masked AutoEncoder.

Xin Xing, Gongbo Liang, Chris Wang, Nathan Jacobs, Ai-Ling Lin

Abstract read
In one paragraph

Article in Bioengineering (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Xin XingDepartment of Computer Science, University of Kentucky, Lexington, KY 40506, USA.ORCID 0000-0001-7207-5149
Gongbo LiangDepartment of Computing and Cyber Security, Texas A&M University-San Antonio, San Antonio, TX 78224, USA.ORCID 0000-0002-6700-6664
Chris WangDepartment of Computer Science, University of Missouri, Columbia, MO 65211, USA.ORCID 0000-0003-3898-3690
Nathan JacobsDepartment of Computer Science & Engineering, Washington University in St. Louis, St. Louis, MO 63130, USA.ORCID 0000-0002-4242-8967
Ai-Ling LinDepartment of Radiology, University of Missouri, Columbia, MO 65212, USA.ORCID 0000-0002-5197-2219

Funding

Supplement to Prebiotics Intervention to Reduce Alzheimer's Disease Risk via Brain-Gut Axis in an APOE4 Mouse ModelRF1AG062480 · NIA · UNIVERSITY OF MISSOURI-COLUMBIA · PI LIN, AI-LING · 2019 to 2020
$3.6M
Multi-Modal MRI to Assess Alzheimer's Disease Prevention in an APOE4 MouseModelR01AG054459 · NIA · UNIVERSITY OF MISSOURI-COLUMBIA · PI LIN, AI-LING · 2017 to 2021
$3.0M
NIA NIH HHS R01 AG054459NIA NIH HHS R01AG054459NIA NIH HHS RF1 AG062480NIA NIH HHS RF1AG062480
6 · The paper itself

Abstract

The COVID-19 pandemic has underscored the urgent need for rapid and accurate diagnosis facilitated by artificial intelligence (AI), particularly in computer-aided diagnosis using medical imaging. However, this context presents two notable challenges: high diagnostic accuracy demand and limited availability of medical data for training AI models. To address these issues, we proposed the implementation of a Masked AutoEncoder (MAE), an innovative self-supervised learning approach, for classifying 2D Chest X-ray images. Our approach involved performing imaging reconstruction using a Vision Transformer (ViT) model as the feature encoder, paired with a custom-defined decoder. Additionally, we fine-tuned the pretrained ViT encoder using a labeled medical dataset, serving as the backbone. To evaluate our approach, we conducted a comparative analysis of three distinct training methods: training from scratch, transfer learning, and MAE-based training, all employing COVID-19 chest X-ray images. The results demonstrate that MAE-based training produces superior performance, achieving an accuracy of 0.985 and an AUC of 0.9957. We explored the mask ratio influence on MAE and found ratio = 0.4 shows the best performance. Furthermore, we illustrate that MAE exhibits remarkable efficiency when applied to labeled data, delivering comparable performance to utilizing only 30% of the original training dataset. Overall, our findings highlight the significant performance enhancement achieved by using MAE, particularly when working with limited datasets. This approach holds profound implications for future disease diagnosis, especially in scenarios where imaging information is scarce.

Indexed as

chest X-ray imageimage classificationself-supervised learningvision transformer (ViT)

Identifiers

PMID37627786
PMCPMC10451788

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.