Evidence map›Paper›PMID 37626757›Full record

ArticleBiomedicines2023

Profile Characterization of Biogenic Amines in Glioblastoma Patients Undergoing Standard-of-Care Treatment.

Orwa Aboud, Yin Liu, Lina Dahabiyeh, Ahmad Abuaisheh, Fangzhou Li, John Paul Aboubechara, Jonathan Riess, Orin Bloch, Rawad Hodeify, Ilias Tagkopoulos and 1 more

Open access · goldAbstract read
In one paragraph

Article in Biomedicines, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Orwa AboudDepartment of Neurology, University of California, Davis, Sacramento, CA 95817, USA.ORCID 0000-0002-7916-1629
Yin LiuDepartment of Neurology, University of California, Davis, Sacramento, CA 95817, USA.
Lina DahabiyehWest Coast Metabolomics Center, University of California Davis, Davis, CA 95616, USA.ORCID 0000-0002-4688-7052
Ahmad AbuaishehSchool of Medicine, Al Balqa Applied University, Al-Salt 19117, Jordan.
Fangzhou LiDepartment of Computer Science, University of California, Davis, Sacramento, CA 95616, USA.ORCID 0000-0002-7623-719X
John Paul AboubecharaDepartment of Neurology, University of California, Davis, Sacramento, CA 95817, USA.ORCID 0000-0002-9363-5704
Jonathan RiessComprehensive Cancer Center, University of California Davis, Sacramento, CA 95817, USA.
Orin BlochDepartment of Neurological Surgery, University of California, Davis, Sacramento, CA 95817, USA.
Rawad HodeifyDepartment of Biotechnology, School of Arts and Sciences, American University of Ras Al Khaimah, Ras Al-Khaimah 10021, United Arab Emirates.ORCID 0000-0002-1016-2287
Ilias TagkopoulosDepartment of Computer Science, University of California, Davis, Sacramento, CA 95616, USA.
Oliver FiehnWest Coast Metabolomics Center, University of California Davis, Davis, CA 95616, USA.ORCID 0000-0002-6261-8928
University of California, Davis · USNeurological Surgery · USAl-Balqa Applied University · JOAmerican University of Ras Al Khaimah · AEUniversity of Jordan · JO

Funding

Staff InvestigatorsP30CA093373 · NCI · UNIVERSITY OF CALIFORNIA DAVIS · PI KC KENT LLOYD · 2002 to 2026
$84.9M
UC Davis Paul Calabresi K12 Clinical Oncology Research Career Development ProgramK12CA138464 · NCI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI BIRKELAND, ANDREW CHARLES, LARA, PRIMO N. · 2011 to 2025
$11.4M
West Coast Metabolomics Center for Compound IdentificationU2CES030158 · NIEHS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI FIEHN, OLIVER · 2018 to 2021
$4.1M
NCI NIH HHS 2K12CA138464-11NCI NIH HHS K12 CA138464NCI NIH HHS P30 CA093373NIEHS NIH HHS U2C ES030158
6 · The paper itself

Abstract

introductionBiogenic amines play important roles throughout cellular metabolism. This study explores a role of biogenic amines in glioblastoma pathogenesis. Here, we characterize the plasma levels of biogenic amines in glioblastoma patients undergoing standard-of-care treatment.

methodsWe examined 138 plasma samples from 36 patients with isocitrate dehydrogenase (IDH) wild-type glioblastoma at multiple stages of treatment. Untargeted gas chromatography-time of flight mass spectrometry (GC-TOF MS) was used to measure metabolite levels. Machine learning approaches were then used to develop a predictive tool based on these datasets.

resultsSurgery was associated with increased levels of 12 metabolites and decreased levels of 11 metabolites. Chemoradiation was associated with increased levels of three metabolites and decreased levels of three other metabolites. Ensemble learning models, specifically random forest (RF) and AdaBoost (AB), accurately classified treatment phases with high accuracy (RF: 0.81 ± 0.04, AB: 0.78 ± 0.05). The metabolites sorbitol and N-methylisoleucine were identified as important predictive features and confirmed via SHAP.

conclusionTo our knowledge, this is the first study to describe plasma biogenic amine signatures throughout the treatment of patients with glioblastoma. A larger study is needed to confirm these results with hopes of developing a diagnostic algorithm.

Indexed as

biogenic aminesconcurrent chemoradiationglioblastomametabolomic profiling

Identifiers

PMID37626757
PMCPMC10452138
OpenAlexW4385812350

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.