Evidence map›Paper›PMID 37625404›Full record

ArticleMolecular cell2023

Tuning Hsp104 specificity to selectively detoxify α-synuclein.

Korrie L Mack, Hanna Kim, Edward M Barbieri, JiaBei Lin, Sylvanne Braganza, Meredith E Jackrel, Jamie E DeNizio, Xiaohui Yan, Edward Chuang, Amber Tariq and 5 more

Open access · greenAbstract read
In one paragraph

Article in Molecular cell, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 25 citations in OpenAlex.

  1. From aggregate structure to disease trajectory: the role of the proteostasis network.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2026
    Review
  2. Chaperone-mediated remodelling of mutant huntingtin.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2026
    Review
  3. Review
  4. Article
  5. Article
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  8. Article
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  12. Design principles to tailor Hsp104 therapeutics.bioRxiv : the preprint server for biology · 2024
    Article
  13. Review
  14. Article
  15. (Dis)Solving the problem of aberrant protein states.Disease models & mechanisms · 2021
    Review
  16. Combating deleterious phase transitions in neurodegenerative disease.Biochimica et biophysica acta. Molecular cell research · 2021
    Review
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Korrie L MackDepartment of Biochemistry and Biophysics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA 19104, USA; Biochemistry and Molecular Biophysics Graduate Group, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA 19104, USA.
Hanna KimDepartment of Biological Sciences, The University of Alabama, Tuscaloosa, AL 35487, USA.
Edward M BarbieriDepartment of Biochemistry and Biophysics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA 19104, USA.
JiaBei LinDepartment of Biochemistry and Biophysics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA 19104, USA.
Sylvanne BraganzaDepartment of Biochemistry and Biophysics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA 19104, USA.
Meredith E JackrelDepartment of Biochemistry and Biophysics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA 19104, USA.
Jamie E DeNizioDepartment of Biochemistry and Biophysics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA 19104, USA.
Xiaohui YanDepartment of Biological Sciences, The University of Alabama, Tuscaloosa, AL 35487, USA.
Edward ChuangDepartment of Biochemistry and Biophysics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA 19104, USA; Pharmacology Graduate Group, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA 19104, USA.
Amber TariqDepartment of Biochemistry and Biophysics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA 19104, USA.
Ryan R CupoDepartment of Biochemistry and Biophysics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA 19104, USA; Pharmacology Graduate Group, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA 19104, USA.
Laura M CastellanoDepartment of Biochemistry and Biophysics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA 19104, USA.
Kim A CaldwellDepartment of Biological Sciences, The University of Alabama, Tuscaloosa, AL 35487, USA.
Guy A CaldwellDepartment of Biological Sciences, The University of Alabama, Tuscaloosa, AL 35487, USA. Electronic address: gcaldwel@ua.edu.
James ShorterDepartment of Biochemistry and Biophysics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA 19104, USA; Biochemistry and Molecular Biophysics Graduate Group, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA 19104, USA; Pharmacology Graduate Group, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA 19104, USA. Electronic address: jshorter@pennmedicine.upenn.edu.
University of Pennsylvania · USUniversity of Alabama · US

Funding

PREDOCTORAL TRAINING PROGRAM IN PHARMACOLOGYT32GM008076 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI BLENDY, JULIE A · 1985 to 2023
$10.8M
STRUCTURAL BIOLOGY TRAINING PROGRAMT32GM008275 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI WAND, A. JOSHUA · 1988 to 2018
$6.0M
Defining the mechanistic basis of a prion disaggregaseR01GM099836 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI SHORTER, JAMES · 2013 to 2024
$3.9M
Amyloid elimination by Hsp104 and substrate-optimized variantsDP2OD002177 · OD · UNIVERSITY OF PENNSYLVANIA · PI SHORTER, JAMES · 2007 to 2007
$2.4M
Safeguards of the Proteome: Elucidating the Roles of Protein DisaggregasesR35GM128772 · NIGMS · WASHINGTON UNIVERSITY · PI JACKREL, MEREDITH E. · 2018 to 2022
$2.0M
Functional Analysis Of The Intersection of Mitochondrial Stress and NeurodegenerationR15NS106460 · NINDS · UNIVERSITY OF ALABAMA IN TUSCALOOSA · PI CALDWELL, KIM A · 2018 to 2020
$556k
MECHANISMS AND MODULATORS OF RESILIENCE TO DOPAMINERGIC NEURODEGENERATIONR15NS104857 · NINDS · UNIVERSITY OF ALABAMA IN TUSCALOOSA · PI CALDWELL, GUY A · 2018 to 2018
$422k
Synthetic Reconstruction of Human Chaperone Networks in Yeast Models of NeurodegenerationK99AG075242 · NIA · UNIVERSITY OF PENNSYLVANIA · PI BARBIERI, EDWARD MATTHEW · 2023 to 2024
$231k
Programming Human Chaperone Systems Against Neurodegenerative DiseaseF32NS108598 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI BARBIERI, EDWARD MATTHEW · 2019 to 2021
$193k
Engineering mitochondrial protein disaggregases for neurodegenerative diseaseF31AG060672 · NIA · UNIVERSITY OF PENNSYLVANIA · PI CUPO, RYAN R · 2018 to 2020
$122k
NIA NIH HHS F31 AG060672NIA NIH HHS K99 AG075242NIGMS NIH HHS R01 GM099836NIGMS NIH HHS R35 GM128772NIGMS NIH HHS T32 GM008076NIGMS NIH HHS T32 GM008275NIH HHS DP2 OD002177NINDS NIH HHS F32 NS108598NINDS NIH HHS R15 NS104857NINDS NIH HHS R15 NS106460
6 · The paper itself

Abstract

Hsp104 is an AAA+ protein disaggregase that solubilizes and reactivates proteins trapped in aggregated states. We have engineered potentiated Hsp104 variants to mitigate toxic misfolding of α-synuclein, TDP-43, and FUS implicated in fatal neurodegenerative disorders. Though potent disaggregases, these enhanced Hsp104 variants lack substrate specificity and can have unfavorable off-target effects. Here, to lessen off-target effects, we engineer substrate-specific Hsp104 variants. By altering Hsp104 pore loops that engage substrate, we disambiguate Hsp104 variants that selectively suppress α-synuclein toxicity but not TDP-43 or FUS toxicity. Remarkably, α-synuclein-specific Hsp104 variants emerge that mitigate α-synuclein toxicity via distinct ATPase-dependent mechanisms involving α-synuclein disaggregation or detoxification of soluble α-synuclein conformers. Importantly, both types of α-synuclein-specific Hsp104 variant reduce dopaminergic neurodegeneration in a C. elegans model of Parkinson's disease more effectively than non-specific variants. We suggest that increasing the substrate specificity of enhanced disaggregases could be applied broadly to tailor therapeutics for neurodegenerative disease.

Indexed as

Neurodegenerative DiseasesSaccharomyces cerevisiae Proteinsalpha-SynucleinAnimalsCaenorhabditis elegansHeat-Shock ProteinsHumansalpha-SynucleinHeat-Shock ProteinsSaccharomyces cerevisiae Proteinsalpha-synucleindisaggregaseHsp104neurodegenerationParkinson’s diseaseprotein engineering

Identifiers

PMID37625404
PMCPMC10530207
OpenAlexW4386176637

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.