Evidence map›Paper›PMID 37624861›Full record

ArticlePLoS genetics2023

Localization of oskar mRNA by agglomeration in ribonucleoprotein granules.

Catherine E Eichler, Hui Li, Michelle E Grunberg, Elizabeth R Gavis

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. How germ granules promote germ cell fate.Nature reviews. Genetics · 2024
    Review
  8. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Catherine E EichlerDepartment of Molecular Biology, Princeton University, Princeton, New Jersey, United States of America.ORCID 0009-0008-5548-271X
Hui LiDepartment of Molecular Biology, Princeton University, Princeton, New Jersey, United States of America.
Michelle E GrunbergDepartment of Molecular Biology, Princeton University, Princeton, New Jersey, United States of America.ORCID 0000-0002-8534-2135
Elizabeth R GavisDepartment of Molecular Biology, Princeton University, Princeton, New Jersey, United States of America.ORCID 0000-0003-0251-0760
Princeton University · US

Funding

PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM007388 · NIGMS · PRINCETON UNIVERSITY · PI CRISTEA, ILEANA M. · 1985 to 2022
$27.4M
Mechanisms of mRNA localization and translational control in Drosophila developmentR35GM126967 · NIGMS · PRINCETON UNIVERSITY · PI ELIZABETH R GAVIS · 2018 to 2026
$5.9M
NIGMS NIH HHS R35 GM126967NIGMS NIH HHS T32 GM007388
6 · The paper itself

Abstract

Localization of oskar mRNA to the posterior of the Drosophila oocyte is essential for abdominal patterning and germline development. oskar localization is a multi-step process involving temporally and mechanistically distinct transport modes. Numerous cis-acting elements and trans-acting factors have been identified that mediate earlier motor-dependent transport steps leading to an initial accumulation of oskar at the posterior. Little is known, however, about the requirements for the later localization phase, which depends on cytoplasmic flows and results in the accumulation of large oskar ribonucleoprotein granules, called founder granules, by the end of oogenesis. Using super-resolution microscopy, we show that founder granules are agglomerates of smaller oskar transport particles. In contrast to the earlier kinesin-dependent oskar transport, late-phase localization depends on the sequence as well as on the structure of the spliced oskar localization element (SOLE), but not on the adjacent exon junction complex deposition. Late-phase localization also requires the oskar 3' untranslated region (3' UTR), which targets oskar to founder granules. Together, our results show that 3' UTR-mediated targeting together with SOLE-dependent agglomeration leads to accumulation of oskar in large founder granules at the posterior of the oocyte during late stages of oogenesis. In light of previous work showing that oskar transport particles are solid-like condensates, our findings indicate that founder granules form by a process distinct from that of well-characterized ribonucleoprotein granules like germ granules, P bodies, and stress granules. Additionally, they illustrate how an individual mRNA can be adapted to exploit different localization mechanisms depending on the cellular context.

Indexed as

Cytoplasmic Ribonucleoprotein GranulesStress Granules3' Untranslated RegionsAnimalsCytoplasmDrosophilaDrosophila ProteinsRNA, Messenger3' Untranslated RegionsDrosophila Proteinsosk protein, DrosophilaRNA, Messenger

Identifiers

PMID37624861
PMCPMC10484445
OpenAlexW4386158065

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.