Evidence map›Paper›PMID 37624818›Full record

ArticlePloS one2023

Investigations into SARS-CoV-2 and other coronaviruses on mink farms in France late in the first year of the COVID-19 pandemic.

Marine Wasniewski, Franck Boué, Céline Richomme, Etienne Simon-Lorière, Sylvie Van der Werf, Flora Donati, Vincent Enouf, Yannick Blanchard, Véronique Beven, Estelle Leperchois and 5 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Spike destabilization attenuates Mink Cluster 5 SARS-CoV-2.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 1 country.

Marine WasniewskiLyssavirus Unit, Nancy Laboratory for Rabies and Wildlife, ANSES, Malzéville, France.ORCID 0000-0001-5054-3634
Franck BouéWildlife Surveillance and Eco-epidemiology Unit, Nancy Laboratory for Rabies and Wildlife, ANSES, Malzéville, France.
Céline RichommeWildlife Surveillance and Eco-epidemiology Unit, Nancy Laboratory for Rabies and Wildlife, ANSES, Malzéville, France.
Etienne Simon-LorièreG5 Evolutionary Genomics of RNA Viruses, Institut Pasteur, Université Paris Cité, Paris, France.
Sylvie Van der WerfMolecular Genetics of RNA Viruses, CNRS UMR 3569, Institut Pasteur, Université Paris Cité, Paris, France.
Flora DonatiMolecular Genetics of RNA Viruses, CNRS UMR 3569, Institut Pasteur, Université Paris Cité, Paris, France.
Vincent EnoufMolecular Genetics of RNA Viruses, CNRS UMR 3569, Institut Pasteur, Université Paris Cité, Paris, France.
Yannick BlanchardUnit of Viral Genetics and Biosafety, Ploufragan-Plouzané-Niort Laboratory, ANSES, Ploufragan, France.
Véronique BevenUnit of Viral Genetics and Biosafety, Ploufragan-Plouzané-Niort Laboratory, ANSES, Ploufragan, France.
Estelle LeperchoisDYNAMICURE INSERM U1311 UNIROUEN, Université de Caen, Caen, France.
Bryce LeterrierDYNAMICURE INSERM U1311 UNIROUEN, Université de Caen, Caen, France.
Sandrine CorbetVirology Department, Caen University Hospital, Caen, France.
Meriadeg Le GouilDYNAMICURE INSERM U1311 UNIROUEN, Université de Caen, Caen, France.ORCID 0000-0002-3672-9974
Elodie Monchatre-LeroyNancy Laboratory for Rabies and Wildlife, ANSES, Malzéville, France.
Evelyne Picard-MeyerLyssavirus Unit, Nancy Laboratory for Rabies and Wildlife, ANSES, Malzéville, France.
Agence Nationale de Sécurité Sanitaire de l’Alimentation, de l’Environnement et du Travail · FRCentre National de la Recherche Scientifique · FRInserm · FRCentre Hospitalier de Niort · FRInstitut Pasteur · FR

Funding

Inter-regional study of transmission, adaptation and pathogenesis of viruses with pandemic potential in Southeast Asia and West/Central AfricaU01AI151758 · NIAID · INSTITUT PASTEUR · PI SAKUNTABHAI, ANAVAJ, SIMON-LORIERE, ETIENNE · 2020 to 2024
$6.7M
NIAID NIH HHS U01 AI151758
6 · The paper itself

Abstract

Soon after the beginning of the COVID-19 pandemic in early 2020, the Betacoronavirus SARS-CoV-2 infection of several mink farms breeding American minks (Neovison vison) for fur was detected in various European countries. The risk of a new reservoir being formed and of a reverse zoonosis from minks quickly became a major concern. The aim of this study was to investigate the four French mink farms to see whether SARS-CoV-2 was circulating there in late 2020. The investigations took place during the slaughtering period, thus facilitating different types of sampling (swabs and blood). On one of the four mink farms, 96.6% of serum samples were positive when tested with a SARS-CoV-2 ELISA coated with purified N protein recombinant antigen, and 54 out of 162 (33%) pharyngo-tracheal swabs were positive by RT-qPCR. The genetic variability among 12 SARS-CoV-2 genomes sequenced from this farm indicated the co-circulation of several lineages at the time of sampling. All the SARS-CoV-2 genomes detected were nested within the 20A clade (Nextclade), together with SARS-CoV-2 genomes from humans sampled during the same period. The percentage of SARS-CoV-2 seropositivity by ELISA varied between 0.3 and 1.1% on the other three farms. Interestingly, among these three farms, 11 pharyngo-tracheal swabs and 3 fecal pools from two farms were positive by end-point RT-PCR for an Alphacoronavirus very similar to a mink coronavirus sequence observed on Danish farms in 2015. In addition, a mink Caliciviridae was identified on one of the two farms positive for Alphacoronavirus. The clinical impact of these inapparent viral infections is not known. The co-infection of SARS-CoV-2 with other viruses on mink farms could help explain the diversity of clinical symptoms noted on different infected farms in Europe. In addition, the co-circulation of an Alphacoronavirus and SARS-CoV-2 on a mink farm would potentially increase the risk of viral recombination between alpha and betacoronaviruses as already suggested in wild and domestic animals, as well as in humans.

Indexed as

AlphacoronavirusCOVID-19AnimalsAsymptomatic InfectionsFarmsFranceHumansMinkPandemicsSARS-CoV-2

Identifiers

PMID37624818
PMCPMC10456147
OpenAlexW4386158408

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.