Evidence map›Paper›PMID 37623691›Full record

ArticleJournal of imaging2023

Biased Deep Learning Methods in Detection of COVID-19 Using CT Images: A Challenge Mounted by Subject-Wise-Split ISFCT Dataset.

Shiva Parsarad, Narges Saeedizadeh, Ghazaleh Jamalipour Soufi, Shamim Shafieyoon, Farzaneh Hekmatnia, Andrew Parviz Zarei, Samira Soleimany, Amir Yousefi, Hengameh Nazari, Pegah Torabi and 5 more

Abstract read
In one paragraph

Article in Journal of imaging, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Shiva ParsaradMedical Image and Signal Processing Research Center, School of Advanced Technologies in Medicine, Isfahan University of Medical Sciences, Isfahan JM76+5M3, Iran.
Narges SaeedizadehMedical Image and Signal Processing Research Center, School of Advanced Technologies in Medicine, Isfahan University of Medical Sciences, Isfahan JM76+5M3, Iran.
Ghazaleh Jamalipour SoufiDepartment of Radiology, School of Medicine, Isfahan University of Medical Sciences, Isfahan JM76+5M3, Iran.
Shamim ShafieyoonDepartment of Radiology, School of Medicine, Isfahan University of Medical Sciences, Isfahan JM76+5M3, Iran.
Farzaneh HekmatniaSt. George's Hospital, London SW17 0RE, UK.
Andrew Parviz ZareiSt. George's Hospital, London SW17 0RE, UK.
Samira SoleimanyDepartment of Radiology, School of Medicine, Isfahan University of Medical Sciences, Isfahan JM76+5M3, Iran.
Amir YousefiDepartment of Radiology, School of Medicine, Isfahan University of Medical Sciences, Isfahan JM76+5M3, Iran.
Hengameh NazariDepartment of Radiology, School of Medicine, Isfahan University of Medical Sciences, Isfahan JM76+5M3, Iran.
Pegah TorabiDepartment of Radiology, School of Medicine, Isfahan University of Medical Sciences, Isfahan JM76+5M3, Iran.
Abbas S MilaniSchool of Engineering, University of British Columbia, Kelowna, BC V1V 1V7, Canada.ORCID 0000-0003-1173-9989
Seyed Ali Madani TonekaboniCyclica Inc., Toronto, ON M5J 1A7, Canada.
Hossein RabbaniMedical Image and Signal Processing Research Center, School of Advanced Technologies in Medicine, Isfahan University of Medical Sciences, Isfahan JM76+5M3, Iran.
Ali HekmatniaDepartment of Radiology, School of Medicine, Isfahan University of Medical Sciences, Isfahan JM76+5M3, Iran.
Rahele KafiehMedical Image and Signal Processing Research Center, School of Advanced Technologies in Medicine, Isfahan University of Medical Sciences, Isfahan JM76+5M3, Iran.ORCID 0000-0003-0087-9476

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Accurate detection of respiratory system damage including COVID-19 is considered one of the crucial applications of deep learning (DL) models using CT images. However, the main shortcoming of the published works has been unreliable reported accuracy and the lack of repeatability with new datasets, mainly due to slice-wise splits of the data, creating dependency between training and test sets due to shared data across the sets. We introduce a new dataset of CT images (ISFCT Dataset) with labels indicating the subject-wise split to train and test our DL algorithms in an unbiased manner. We also use this dataset to validate the real performance of the published works in a subject-wise data split. Another key feature provides more specific labels (eight characteristic lung features) rather than being limited to COVID-19 and healthy labels. We show that the reported high accuracy of the existing models on current slice-wise splits is not repeatable for subject-wise splits, and distribution differences between data splits are demonstrated using t-distribution stochastic neighbor embedding. We indicate that, by examining subject-wise data splitting, less complicated models show competitive results compared to the exiting complicated models, demonstrating that complex models do not necessarily generate accurate and repeatable results.

Indexed as

COVID-19deep learningrepeatabilityslice-wise data splitsubject-wise data split

Identifiers

PMID37623691
PMCPMC10455108

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.