Evidence map›Paper›PMID 37623225›Full record

ArticleCurrent issues in molecular biology2023

Phenotypic Characterization and Comparative Genomic Analyses of Mycobacteriophage WIVsmall as A New Member Assigned to F1 Subcluster.

Xinge Guo, Jing Zhang, Yuhan Wang, Fang Zhou, Qiming Li, Tieshan Teng

Open access · goldAbstract read
In one paragraph

Article in Current issues in molecular biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Viruses · 2024
    Article
  4. Synergistic efficacy of phage Henu10 with antibiotics againstFrontiers in cellular and infection microbiology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Xinge GuoInstitute of Biomedical Informatics, School of Basic Medical Sciences, Henan University, Kaifeng 475004, China.
Jing ZhangInstitute of Biomedical Informatics, School of Basic Medical Sciences, Henan University, Kaifeng 475004, China.
Yuhan WangInstitute of Biomedical Informatics, School of Basic Medical Sciences, Henan University, Kaifeng 475004, China.
Fang ZhouInstitute of Biomedical Informatics, School of Basic Medical Sciences, Henan University, Kaifeng 475004, China.
Qiming LiInstitute of Biomedical Informatics, School of Basic Medical Sciences, Henan University, Kaifeng 475004, China.
Tieshan TengInstitute of Biomedical Informatics, School of Basic Medical Sciences, Henan University, Kaifeng 475004, China.
Henan University · CN

Funding

China Postdoctoral Science Foundation 2021m690095Natural Science Foundation of Henan Province 202300410052The Key R&D and Promotion Projects of Henan Province 222102310621
6 · The paper itself

Abstract

In this study, we conducted the morphological observation, biological and genomic characterization, evolutionary analysis, comparative genomics description, and proteome identification of a recently isolated mycobacteriophage, WIVsmall. Morphologically, WIVsmall is classified as a member of the Siphoviridae family, characterized by a flexible tail, measuring approximately 212 nm in length. The double-stranded phage genome DNA of WIVsmall spans 53,359 base pairs, and exhibits a G + C content of 61.01%. The genome of WIVsmall comprises 103 protein-coding genes, while no tRNA genes were detected. The genome annotation unveiled the presence of functional gene clusters responsible for mycobacteriophage assembly and maturation, replication, cell lysis, and functional protein synthesis. Based on the analysis of the phylogenetic tree, the genome of WIVsmall was classified as belonging to subgroup F1. A comparative genomics analysis indicated that the WIVsmall genome exhibited the highest similarity to the phage SG4, with a percentage of 64%. The single-step growth curve analysis of WIVsmall revealed a latent period of 120 min, and an outbreak period of 200 min.

Indexed as

antibiotic-resistant bacteriamycobacteriophagemycobacterium

Identifiers

PMID37623225
PMCPMC10453261
OpenAlexW4385557115

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.