Evidence map›Paper›PMID 37621457›Full record

ArticleFrontiers in medicine2023

Genetic and geographic influence on phenotypic variation in European sarcoidosis patients.

Sandra Freitag-Wolf, Jonas C Schupp, Björn C Frye, Annegret Fischer, Raihanatul Anwar, Robert Kieszko, Violeta Mihailović-Vučinić, Janusz Milanowski, Dragana Jovanovic, Gernot Zissel and 32 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Big data in sarcoidosis.Current opinion in pulmonary medicine · 2024
    Review
  6. Phenotypes and Serum Biomarkers in Sarcoidosis.Diagnostics (Basel, Switzerland) · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

42 authors at 20 institutions in 13 countries.

Sandra Freitag-WolfInstitute of Medical Informatics and Statistics, Kiel University, Kiel, Germany.
Jonas C SchuppDepartment of Pneumology, Faculty of Medicine, University Medical Centre, Freiburg, Germany.
Björn C FryeDepartment of Pneumology, Faculty of Medicine, University Medical Centre, Freiburg, Germany.
Annegret FischerInstitute of Clinical Molecular Biology, Kiel University, Kiel, Germany.
Raihanatul AnwarInstitute of Medical Informatics and Statistics, Kiel University, Kiel, Germany.
Robert KieszkoDepartment of Pneumonology, Oncology and Allergology, Medical University of Lublin, Lublin, Poland.
Violeta Mihailović-VučinićDepartment of Pneumology, University Hospital, Belgrade, Serbia.
Janusz MilanowskiDepartment of Pneumonology, Oncology and Allergology, Medical University of Lublin, Lublin, Poland.
Dragana JovanovicDepartment of Pneumology, University Hospital, Belgrade, Serbia.
Gernot ZisselDepartment of Pneumology, Faculty of Medicine, University Medical Centre, Freiburg, Germany.
Elena BargagliRespiratory Diseases and Lung Transplant Unit, University Hospital, Siena, Italy.
Paola RottoliRespiratory Diseases and Lung Transplant Unit, University Hospital, Siena, Italy.
Dragos BumbaceaDepartment of Cardio-Thoracic Medicine, Carol Davila University of Medicine and Pharmacy, Bucharest, Romania.
René JonkersPulmonology Department, Academic Medical Center Amsterdam, Amsterdam, Netherlands.
Ling-Pei HoOxford Sarcoidosis Service, Oxford University Hospitals NHS Foundation Trust, Churchill Hospital, Oxford, United Kingdom.
Karoline I GaedeMedical Hospital, Research Center Borstel, Borstel, Germany.
Anna DubaniewiczDepartment of Pulmonology, Medical University of Gdansk, Gdansk, Poland.
Ben G MarshallDepartment of Respiratory Medicine, University Hospital, Southampton, United Kingdom.
Andreas GüntherDepartment of Pneumology and Intensive Care, University Hospital, Giessen, Germany.
Martin PetrekFaculty of Medicine and Dentistry, Palacký University and University Hospital Olomouc, Olomouc, Czechia.
Michael P KeaneDivision of Pulmonary and Critical Care Medicine, University College Dublin and St Vincent's University Hospital, Dublin, Ireland.
Sigridur O HaraldsdottirLandspitali, University Hospital, Reykjavik, Iceland.
Francesco BonellaRuhrlandklinik, Westdeutsches Lungenzentrum am Universitätsklinikum Essen, Universitätsklinik Essen, Essen, Germany.
Christian GrahHospital Berlin-Havelhöhe, Berlin, Germany.
Tatjana Peroš-GolubičićPulmonary Department, University Hospital Jordanovac, Zagreb, Croatia.
Zamir KadijaFoundation IRCCS Policlinico San Matteo - Pulmonology Unit, Pavia, Italy.
Stefan PabstDepartment of Pneumology, University Hospital, Bonn, Germany.
Christian GrohéEvangelische Lungenklinik Berlin, Berlin, Germany.
János StrauszNational Koranyi Institute, Budapest, Hungary.
Martina SafrankovaThomayer Hospital and 1st Faculty of Medicine, Charles University, Praha, Czechia.
Ann MillarPulmonary Department, University Hospital, Bristol, United Kingdom.
Jiří HomolkaPrague General Hospital, Charles University, Prague, Czechia.
Wim A WuytsLaboratory of Respiratory Diseases and Thoracic Surgery (BREATHE), University Hospital, Leuven, Belgium.
Lisa G SpencerLiverpool Interstitial Lung Disease Service, Aintree Chest Centre, Liverpool University Hospitals NHS FT, Liverpool, United Kingdom.
Michael PfeiferDepartment of Pneumology, University Hospital Regensburg, Regensburg, Germany.
Dominique ValeyreGroupe Hospitalier Avicenne-Jean Verdier-René Muret, Service de Pneumologie, Bobigny, France.
Venerino PolettiPulmonary Unit, Department of Thoracic Diseases, Azienda USL Romagna, GB Morgagni-L-Pierantoni Hospital, Forlì, Italy.
Hubertus WirtzDepartment of Pneumology, University Hospital Leipzig, Leipzig, Germany.
Antje PrasseDepartment of Pneumology, Faculty of Medicine, University Medical Centre, Freiburg, Germany.
Stefan SchreiberInstitute of Clinical Molecular Biology, Kiel University, Kiel, Germany.
Astrid DempfleInstitute of Medical Informatics and Statistics, Kiel University, Kiel, Germany.
Joachim Müller-QuernheimDepartment of Pneumology, Faculty of Medicine, University Medical Centre, Freiburg, Germany.
Christian-Albrechts-Universität zu Kiel · DEUniversity Medical Center Freiburg · DECharles University · CZMedical University of Lublin · PLUniversity of Siena · ITAmsterdam UMC Location University of Amsterdam · NLAzienda Unità Sanitaria Locale Della Romagna · ITCarol Davila University of Medicine and Pharmacy · ROChurchill Hospital · GBEssen University Hospital · DEEvangelische Lungenklinik Berlin · DEForschungsinstitut Havelhöhe · DEGdańsk Medical University · PLGerman Center for Lung Research · DEHôpital Avicenne · FRIstituti di Ricovero e Cura a Carattere Scientifico · ITKU Leuven · BEOrszágos Korányi Tbc és Pulmonológiai Intézet · HUPalacký University Olomouc · CZResearch Center Borstel - Leibniz Lung Center · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Sarcoidosis is a highly variable disease in terms of organ involvement, type of onset and course. Associations of genetic polymorphisms with sarcoidosis phenotypes have been observed and suggest genetic signatures. Methods: After obtaining a positive vote of the competent ethics committee we genotyped 1909 patients of the deeply phenotyped Genetic-Phenotype Relationship in Sarcoidosis (GenPhenReSa) cohort of 31 European centers in 12 countries with 116 potentially disease-relevant single-nucleotide polymorphisms (SNPs). Using a meta-analysis, we investigated the association of relevant phenotypes (acute vs. sub-acute onset, phenotypes of organ involvement, specific organ involvements, and specific symptoms) with genetic markers. Subgroups were built on the basis of geographical, clinical and hospital provision considerations. Results: In the meta-analysis of the full cohort, there was no significant genetic association with any considered phenotype after correcting for multiple testing. In the largest sub-cohort (Serbia), we confirmed the known association of acute onset with TNF and reported a new association of acute onset an HLA polymorphism. Multi-locus models with sets of three SNPs in different genes showed strong associations with the acute onset phenotype in Serbia and Lublin (Poland) demonstrating potential region-specific genetic links with clinical features, including recently described phenotypes of organ involvement. Discussion: The observed associations between genetic variants and sarcoidosis phenotypes in subgroups suggest that gene-environment-interactions may influence the clinical phenotype. In addition, we show that two different sets of genetic variants are permissive for the same phenotype of acute disease only in two geographic subcohorts pointing to interactions of genetic signatures with different local environmental factors. Our results represent an important step towards understanding the genetic architecture of sarcoidosis.

Indexed as

genetic polymorphismgenetic risk factorsgenotype–phenotype-relationshipregion-specific genetic linkssarcoidosis

Identifiers

PMID37621457
PMCPMC10446882
OpenAlexW4385693785

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.