Evidence map›Paper›PMID 37620620›Full record

ArticlePlanta2023

Cas13a-based multiplex RNA targeting for potato virus Y.

Xiaohui Zhan, Zhen Tu, Wenlei Song, Bihua Nie, Shengchun Li, Jiang Zhang, Fengjuan Zhang

Abstract read
PubMed Publisher
In one paragraph

Article in Planta, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Xiaohui Zhan *State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei Hongshan Laboratory, Hubei University, Wuhan, 430062, China.
Zhen Tu *Key Laboratory of Potato Biology and Biotechnology, Key Laboratory of Horticultural Plant Biology, Huazhong Agricultural University, Wuhan, 430070, China.
Wenlei SongState Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei Hongshan Laboratory, Hubei University, Wuhan, 430062, China.
Bihua NieKey Laboratory of Potato Biology and Biotechnology, Key Laboratory of Horticultural Plant Biology, Huazhong Agricultural University, Wuhan, 430070, China.
Shengchun LiState Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei Hongshan Laboratory, Hubei University, Wuhan, 430062, China.
Jiang ZhangState Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei Hongshan Laboratory, Hubei University, Wuhan, 430062, China.
Fengjuan ZhangState Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei Hongshan Laboratory, Hubei University, Wuhan, 430062, China. zhangfengjuan@hubu.edu.cn.ORCID http://orcid.org/0000-0002-6727-7974
Hubei University · CNHuazhong Agricultural University · CNAgricultural Genomics Institute at Shenzhen · CN

Funding

National Natural Science Foundation of China 32271546National Natural Science Foundation of China 32271912
6 · The paper itself

Abstract

MAIN

conclusionThe Cas13a-based multiplex RNA targeting system can be engineered to confer resistance to RNA viruses, whereas the number and expression levels of gRNAs have no significant effect on viral interference. The CRISPR-Cas systems provide adaptive immunity to bacterial and archaeal species against invading phages and foreign plasmids. The class 2 type VI CRISPR/Cas effector Cas13a has been harnessed to confer the protection against RNA viruses in diverse eukaryotic species. However, whether the number and expression levels of guide RNAs (gRNAs) have effects on the efficiency of RNA virus inhibition is unknown. Here, we repurpose CRISPR/Cas13a in combination with an endogenous tRNA-processing system (polycistronic tRNA-gRNA) to target four genes of potato virus Y (PVY) with varying expression levels. We expressed Cas13a and four different gRNAs in potato lines, and the transgenic plants expressing multiple gRNAs displayed similar suppression of PVY accumulation and reduced disease symptoms as those expressing a single gRNA. Moreover, PTG/Cas13a-transformed plants with different expression levels of multiple gRNAs displayed similar resistance to PVY strains. Collectively, this study suggests that the Cas13a-based multiplex RNA targeting system can be utilized to engineer resistance to RNA viruses in plants, whereas the number and expression levels of gRNAs have no significant effect on CRISPR/Cas13a-mediated viral interference in plants.

Indexed as

PotyvirusCRISPR-Cas SystemsPlants, Genetically ModifiedRNARNA Processing, Post-TranscriptionalRNACas13aGuide RNAMultiplex RNA targetingPotato virus YResistance

Identifiers

PMID37620620
OpenAlexW4386152859

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.