Evidence map›Paper›PMID 37615706›Full record

ArticlePlant cell reports2023

CYP72D19 from Tripterygium wilfordii catalyzes C-2 hydroxylation of abietane-type diterpenoids.

Jie Gao, Lin Ma, Yuan Liu, Lichan Tu, Xiaoyi Wu, Jian Wang, Dan Li, Xianan Zhang, Wei Gao, Yifeng Zhang and 1 more

Abstract read
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In one paragraph

Article in Plant cell reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Jie GaoSchool of Traditional Chinese Medicine, Capital Medical University, Beijing, 100069, China.
Lin MaSchool of Traditional Chinese Medicine, Capital Medical University, Beijing, 100069, China.
Yuan LiuSchool of Traditional Chinese Medicine, Capital Medical University, Beijing, 100069, China.
Lichan TuKey Laboratory of Novel Targets and Drug Study for Neural Repair of Zhejiang Province, School of Medicine, Hangzhou City University, Hangzhou, 310015, China.
Xiaoyi WuSchool of Traditional Chinese Medicine, Capital Medical University, Beijing, 100069, China.
Jian WangNational Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, National Resource Center for Chinese Materia Medica, Chinese Academy of Chinese Medical Sciences, Beijing, 100700, China.
Dan LiSchool of Pharmaceutical Sciences, Capital Medical University, Beijing, 100069, China.
Xianan ZhangSchool of Traditional Chinese Medicine, Capital Medical University, Beijing, 100069, China.
Wei GaoSchool of Traditional Chinese Medicine, Capital Medical University, Beijing, 100069, China.
Yifeng ZhangNational Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, National Resource Center for Chinese Materia Medica, Chinese Academy of Chinese Medical Sciences, Beijing, 100700, China. yifengzhang06@126.com.ORCID http://orcid.org/0000-0002-6380-4431
Changli LiuSchool of Traditional Chinese Medicine, Capital Medical University, Beijing, 100069, China. chaihuzy666@ccmu.edu.cn.
Capital Medical University · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNHangzhou City University

Funding

the Innovation Team and Talents Cultivation Program of National Administration of Traditional Chinese Medicine ZYYCXTD-D-202005the Key Project at central government level: The ability establishment of sustainable use for valuable Chinese medicine resources 2060302the National Key R&D Program of China 2020YFA0908000
6 · The paper itself

Abstract

key messageCYP72D19, the first functional gene of the CYP72D subfamily, catalyzes the C-2 hydroxylation of abietane-type diterpenoids. The abietane-type diterpenoids, e.g., triptolide, tripdiolide, and 2-epitripdiolide, are the main natural products for the anti-tumor, anti-inflammatory, and immunosuppressive activities of Tripterygium wilfordii, while their biosynthetic pathways are not resolved. Here, we cloned and characterized the CYP72D19-catalyzed C-2 hydroxylation of dehydroabietic acid, a compound that has been proven to be a biosynthetic intermediate in triptolide biosynthesis. Through molecular docking and site-directed mutagenesis, L386, L387, and I493 near the active pocket were found to have an important effect on the enzyme activity, which also indicates that steric hindrance of residues plays an important role in function. In addition, CYP72D19 also catalyzed a variety of abietane-type diterpenoids with benzene ring, presumably because the benzene ring of the substrate molecule stabilized the C-ring, allowing the protein and the substrate to form a relatively stable spatial structure. This is the first demonstration of CYP72D subfamily gene function. Our research provides important genetic elements for the structural modification of active ingredients and the heterologous production of other 2-hydroxyl abietane-type natural products.

Indexed as

Biological ProductsDiterpenesAbietanesBenzeneEpoxy CompoundsHydroxylationMolecular Docking SimulationPhenanthrenesTripterygiumAbietanesBenzeneBiological ProductsDiterpenesEpoxy CompoundsPhenanthrenestriptolideAbietane-typeC-2 hydroxylationCytochrome P450Dehydroabietic acidDiterpenoidsTripterygium wilfordii

Identifiers

PMID37615706
OpenAlexW4386117061

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.