Evidence map›Paper›PMID 37612638›Full record

ArticleBMC cancer2023

TP53 mutation prevalence in normal airway epithelium as a biomarker for lung cancer risk.

Daniel J Craig, Erin L Crawford, Heidi Chen, Eric L Grogan, Steven A Deppen, Thomas Morrison, Sanja L Antic, Pierre P Massion, James C Willey

Abstract read
In one paragraph

Article in BMC cancer, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
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  3. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Daniel J CraigUniversity of Toledo College of Medicine, 3000 Arlington Ave, OH, 43614, Toledo, USA.
Erin L CrawfordUniversity of Toledo College of Medicine, 3000 Arlington Ave, OH, 43614, Toledo, USA.
Heidi ChenVanderbilt University Medical Center, 1301 Medical Center Dr., TN, 37232, Nashville, USA.
Eric L GroganVanderbilt University Medical Center, 1301 Medical Center Dr., TN, 37232, Nashville, USA.
Steven A DeppenVanderbilt University Medical Center, 1301 Medical Center Dr., TN, 37232, Nashville, USA.
Thomas MorrisonAccugenomics Inc, 1410 Commonwealth Dr #105, Wilmington, NC, 28403, USA.
Sanja L AnticVanderbilt University Medical Center, 1301 Medical Center Dr., TN, 37232, Nashville, USA.
Pierre P MassionVanderbilt University Medical Center, 1301 Medical Center Dr., TN, 37232, Nashville, USA.
James C WilleyUniversity of Toledo College of Medicine, 3000 Arlington Ave, OH, 43614, Toledo, USA. james.willey2@utoledo.edu.

Funding

Validation of Biomarkers of Risk for the Early Detection of Lung CancerU01CA152662 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI DEPPEN, STEPHEN, GROGAN, ERIC L · 2010 to 2025
$12.8M
NCI NIH HHS U01 CA152662NIH HHS U01CA152662
6 · The paper itself

Abstract

backgroundThere is a need for biomarkers that improve accuracy compared with current demographic risk indices to detect individuals at the highest lung cancer risk. Improved risk determination will enable more effective lung cancer screening and better stratification of lung nodules into high or low-risk category. We previously reported discovery of a biomarker for lung cancer risk characterized by increased prevalence of TP53 somatic mutations in airway epithelial cells (AEC). Here we present results from a validation study in an independent retrospective case-control cohort.

methodsTargeted next generation sequencing was used to identify mutations within three TP53 exons spanning 193 base pairs in AEC genomic DNA.

resultsTP53 mutation prevalence was associated with cancer status (P < 0.001). The lung cancer detection receiver operator characteristic (ROC) area under the curve (AUC) for the TP53 biomarker was 0.845 (95% confidence limits 0.749-0.942). In contrast, TP53 mutation prevalence was not significantly associated with age or smoking pack-years. The combination of TP53 mutation prevalence with PLCO

conclusionsThese results support the validity of the TP53 mutation prevalence biomarker and justify taking additional steps to assess this biomarker in AEC specimens from a prospective cohort and in matched nasal brushing specimens as a potential non-invasive surrogate specimen.

Indexed as

Lung NeoplasmsBiomarkersEarly Detection of CancerEpitheliumHumansLungProspective StudiesRetrospective StudiesTumor Suppressor Protein p53BiomarkersTP53 protein, humanTumor Suppressor Protein p53BiomarkerLung cancer early detectionLung cancer preventionLung nodule risk classificationNext generation sequencingTP53

Identifiers

PMID37612638
PMCPMC10464352

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.