Evidence map›Paper›PMID 37612452›Full record

ArticleScientific reports2023

Identification and subsequent validation of transcriptomic signature associated with metabolic status in endometrial cancer.

Iwona Sidorkiewicz, Maciej Jóźwik, Angelika Buczyńska, Anna Erol, Marcin Jóźwik, Marcin Moniuszko, Katarzyna Jarząbek, Magdalena Niemira, Adam Krętowski

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Iwona SidorkiewiczClinical Research Centre, Medical University of Białystok, Marii Skłodowskiej-Curie 24a, 15-276, Białystok, Poland. iwona.sidorkiewicz@umb.edu.pl.
Maciej JóźwikDepartment of Gynecology and Gynecologic Oncology, Medical University of Białystok, 15-276, Białystok, Poland.
Angelika BuczyńskaClinical Research Centre, Medical University of Białystok, Marii Skłodowskiej-Curie 24a, 15-276, Białystok, Poland.
Anna ErolClinical Research Centre, Medical University of Białystok, Marii Skłodowskiej-Curie 24a, 15-276, Białystok, Poland.
Marcin JóźwikDepartment of Gynecology and Obstetrics, Collegium Medicum, University of Warmia and Mazury in Olsztyn, 10-045, Olsztyn, Poland.
Marcin MoniuszkoDepartment of Regenerative Medicine and Immune Regulation, Medical University of Bialystok, 15-269, Białystok, Poland.
Katarzyna JarząbekLaboratory of Genetic and Molecular Diagnostics, Maria Skłodowska-Curie Białystok Oncology Center, 15-027, Białystok, Poland.
Magdalena NiemiraClinical Research Centre, Medical University of Białystok, Marii Skłodowskiej-Curie 24a, 15-276, Białystok, Poland.
Adam KrętowskiClinical Research Centre, Medical University of Białystok, Marii Skłodowskiej-Curie 24a, 15-276, Białystok, Poland.
Medical University of Białystok · PLUniversity of Warmia and Mazury in Olsztyn · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aberrant metabolism has been identified as a main driver of cancer. Profiling of metabolism-related pathways in cancer furthers the understanding of tumor plasticity and identification of potential metabolic vulnerabilities. In this prospective controlled study, we established transcriptomic profiles of metabolism-related pathways in endometrial cancer (EC) using a novel method, NanoString nCounter Technology. Fifty-seven ECs and 30 normal endometrial specimens were studied using the NanoString Metabolic Panel, further validated by qRT-PCR with a very high similarity. Statistical analyses were by GraphPad PRISM and Weka software. The analysis identified 11 deregulated genes (FDR ≤ 0.05; |FC|≥ 1.5) in EC: SLC7A11; SLC7A5; RUNX1; LAMA4; COL6A3; PDK1; CCNA1; ENO1; PKM; NR2F1; and NAALAD2. Gene ontology showed direct association of these genes with 'central carbon metabolism (CCM) in cancer'. Thus, 'CCM in cancer' appears to create one of the main metabolic axes in EC. Further, transcriptomic data were functionally validated with drug repurposing on three EC cell lines, with several drug candidates suggested. These results lay the foundation for personalized therapeutic strategies in this cancer. Metabolic plasticity represents a promising diagnostic and therapeutic option in EC.

Indexed as

Endometrial NeoplasmsTranscriptomeCarbonFemaleGene Expression ProfilingGenes, cdcHumansProspective StudiesCarbon

Identifiers

PMID37612452
PMCPMC10447446
OpenAlexW4386098130

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.