Evidence map›Paper›PMID 37610680›Full record

ArticleHuman cell2023

Multi-omic profiling and real time ex vivo modelling of imatinib-resistant dermatofibrosarcoma protuberans with fibrosarcomatous transformation.

Jason Yongsheng Chan, Elizabeth Chun Yong Lee, Zhimei Li, Jing Yi Lee, Abner Herbert Lim, Eileen Poon

Abstract read
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Article in Human cell, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jason Yongsheng ChanDivision of Medical Oncology, National Cancer Centre Singapore, 11 Hospital Drive, Singapore, 169610, Singapore. jason.chan.y.s@nccs.com.sg.ORCID http://orcid.org/0000-0002-4801-3703
Elizabeth Chun Yong LeeCancer Discovery Hub, National Cancer Centre Singapore, Singapore, Singapore.
Zhimei LiCancer Discovery Hub, National Cancer Centre Singapore, Singapore, Singapore.
Jing Yi LeeCancer Discovery Hub, National Cancer Centre Singapore, Singapore, Singapore.
Abner Herbert LimCancer Discovery Hub, National Cancer Centre Singapore, Singapore, Singapore.
Eileen PoonDivision of Medical Oncology, National Cancer Centre Singapore, 11 Hospital Drive, Singapore, 169610, Singapore. eileen.poon.y.l@nccs.com.sg.
National Cancer Centre Singapore · SGDuke-NUS Medical School · SG

Funding

Singapore Ministry of Health's National Medical Research Council SEEDFD21jun-0002Singapore Ministry of Health's National Medical Research Council TA21jun-0005SingHealth Duke-NUS Academic Medical Centre and Oncology ACP Sarcoma Research Fund 08-FY2020/EX/25-A96SingHealth Duke-NUS Academic Medical Centre and Oncology ACP Sarcoma Research Fund 08-FY2020/EX/75-A151
6 · The paper itself

Abstract

Dermatofibrosarcoma protuberans (DFSP) is a rare and indolent cutaneous sarcoma, with the risk of aggressive fibro-sarcomatous transformation. Limited effective options are available for un-resectable or metastatic DFSP beyond targeting the oncogenic PDGF pathway with imatinib therapy. We established a patient-derived xenograft (PDX) and cell line model (designated MDFSP-S1) of imatinib-resistant DFSP with fibro-sarcomatous transformation. Whole genome sequencing identified high-level amplification at chromosomes 17 and 22, whilst homozygous deep deletion was demonstrated at chromosome 9 (CDKN2A, CDKN2B, MTAP). RNA sequencing followed by Sanger sequencing confirmed the pathognomonic COL1A1-PDGFB t (17;22) rearrangement in the original tumour, PDX and cell line model. Immunohistochemistry profiles of the PDX model were consistent with the patient's tumour sample (CD34 + /MIB1 + /SOX10- ). Gene set enrichment analysis highlighted top-scoring Hallmark gene sets in several oncogenic signalling pathways, including potentially targetable MTORC1 signalling and angiogenesis pathways. Antiangiogenic agents (sunitinib, regorafenib, pazopanib, axitinib) and the third-generation irreversible epidermal growth factor receptor (EGFR) tyrosine kinase inhibitor osimertinib exhibited modest anti-proliferative activity in the cell line, with IC50 values between 1 and 10 µM at 72 h. No significant activity was observed with imatinib, palbociclib, everolimus, olaparib, gefitinib and erlotinib (IC50 all > 10 µM). In conclusion, we established MDFSP-S1, a new PDX and cell line model of imatinib-resistant DFSP with fibro-sarcomatous transformation.

Indexed as

Antineoplastic AgentsCell Transformation, NeoplasticDermatofibrosarcomaDrug Resistance, NeoplasmFibrosarcomaImatinib MesylateSkin NeoplasmsAnimalsCell Line, TumorChromosomes, Human, Pair 22HumansMiceMultiomicsSignal TransductionAntineoplastic AgentsImatinib MesylateAYA cancerMulti-omicsPatient-derived xenograftPrecision oncologyRare cancers

Identifiers

PMID37610680
OpenAlexW4386084581

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.