Evidence map›Paper›PMID 37609283›Full record

ArticlebioRxiv : the preprint server for biology2023

Transcriptional pathways across colony biofilm models in the symbiont

Jacob A Vander Griend, Ruth Y Isenberg, Ketan R Kotla, Mark J Mandel

Open access · greenAbstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jacob A Vander GriendDepartment of Medical Microbiology and Immunology, University of Wisconsin-Madison, Madison, WI USA.
Ruth Y IsenbergDepartment of Medical Microbiology and Immunology, University of Wisconsin-Madison, Madison, WI USA.
Ketan R KotlaDepartment of Medical Microbiology and Immunology, University of Wisconsin-Madison, Madison, WI USA.
Mark J MandelDepartment of Medical Microbiology and Immunology, University of Wisconsin-Madison, Madison, WI USA.
University of Wisconsin–Madison · US

Funding

Genetic analysis of beneficial bacterial colonizationR35GM148385 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI Mark J Mandel · 2023 to 2026
$1.8M
NIGMS NIH HHS R35 GM148385
6 · The paper itself

Abstract

Beneficial microbial symbionts that are horizontally acquired by their animal hosts undergo a lifestyle transition from free-living in the environment to associated with host tissues. In the model symbiosis between the Hawaiian bobtail squid and its microbial symbiont

Indexed as

bacterial biofilmcomparative transcriptomicsphosphorelayregulatory pathwayssymbiosistwo-component signaling systems

Identifiers

PMID37609283
PMCPMC10441365
OpenAlexW4385622607

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.