Evidence map›Paper›PMID 37609201›Full record

ArticlebioRxiv : the preprint server for biology2023

Non-Stationary Dynamic Mode Decomposition.

John Ferré, Ariel Rokem, Elizabeth A Buffalo, J Nathan Kutz, Adrienne Fairhall

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

John FerréPhysics Department, University of Washington, Seattle, Washington 98195, USA.
Ariel RokemPsychology Department and eScience Institute, University of Washington, Seattle, Washington 98195, USA.
Elizabeth A BuffaloDepartment of Physiology and Biophysics, University of Washington School of Medicine, Washington National Primate Research Center, Seattle Washington 98195, USA.
J Nathan KutzApplied Mathematics and Electrical and Computer Engineering Department, University of Washington, Seattle, Washington 98195, USA.
Adrienne FairhallPhysiology and Biophysics Department, University of Washington, Seattle, Washington 98195, USA.

Funding

Neural circuit theory and trained recurrent network modeling of rapid learningU19NS107609 · NINDS · UNIVERSITY OF WASHINGTON · PI BUFFALO, ELIZABETH A · 2018 to 2022
$12.6M
NINDS NIH HHS U19 NS107609
6 · The paper itself

Abstract

Many physical processes display complex high-dimensional time-varying behavior, from global weather patterns to brain activity. An outstanding challenge is to express high dimensional data in terms of a dynamical model that reveals their spatiotemporal structure. Dynamic Mode Decomposition is a means to achieve this goal, allowing the identification of key spatiotemporal modes through the diagonalization of a finite dimensional approximation of the Koopman operator. However, DMD methods apply best to time-translationally invariant or stationary data, while in many typical cases, dynamics vary across time and conditions. To capture this temporal evolution, we developed a method, Non-Stationary Dynamic Mode Decomposition (NS-DMD), that generalizes DMD by fitting global modulations of drifting spatiotemporal modes. This method accurately predicts the temporal evolution of modes in simulations and recovers previously known results from simpler methods. To demonstrate its properties, the method is applied to multi-channel recordings from an awake behaving non-human primate performing a cognitive task.

Indexed as

computational neurosciencedata-driven modelingdynamic mode decompositionmulti-variate time-seriesnon-stationary methods

Identifiers

PMID37609201
PMCPMC10441341

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.