Evidence map›Paper›PMID 37608295›Full record

ArticleDiagnostic pathology2023

The multi-omics analyses of acsl1 reveal its translational significance as a tumor microenvironmental and prognostic biomarker in clear cell renal cell carcinoma.

Yang Yang, Jiayu Liang, Junjie Zhao, Xinyuan Wang, Dechao Feng, Hang Xu, Yu Shen, Yaowen Zhang, Jindong Dai, Zhipeng Wang and 2 more

Open access · goldAbstract read
In one paragraph

Article in Diagnostic pathology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
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  10. Reprogramming of fatty acid metabolism in thyroid cancer: Potential targets and mechanisms.Chinese journal of cancer research = Chung-kuo yen cheng yen chiu · 2025
    Article
  11. Frontiers in pharmacology · 2025
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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Yang Yang *Department of Urology, Institute of Urology, West China Hospital, Sichuan University, Chengdu, 610041, China.
Jiayu Liang *Department of Urology, Institute of Urology, West China Hospital, Sichuan University, Chengdu, 610041, China.
Junjie Zhao *Department of Urology, Institute of Urology, West China Hospital, Sichuan University, Chengdu, 610041, China.
Xinyuan WangDepartment of Urology, Institute of Urology, West China Hospital, Sichuan University, Chengdu, 610041, China.
Dechao FengDepartment of Urology, Institute of Urology, West China Hospital, Sichuan University, Chengdu, 610041, China.
Hang XuDepartment of Urology, Institute of Urology, West China Hospital, Sichuan University, Chengdu, 610041, China.
Yu ShenDepartment of Urology, Institute of Urology, West China Hospital, Sichuan University, Chengdu, 610041, China.
Yaowen ZhangDepartment of Urology, Institute of Urology, West China Hospital, Sichuan University, Chengdu, 610041, China.
Jindong DaiDepartment of Urology, Institute of Urology, West China Hospital, Sichuan University, Chengdu, 610041, China.
Zhipeng WangDepartment of Urology, Institute of Urology, West China Hospital, Sichuan University, Chengdu, 610041, China.
Qiang WeiDepartment of Urology, Institute of Urology, West China Hospital, Sichuan University, Chengdu, 610041, China. zhliu@scu.edu.cn.
Zhenhua LiuDepartment of Urology, Institute of Urology, West China Hospital, Sichuan University, Chengdu, 610041, China. weiqiang933@126.com.
Sichuan University · CNWuhou District People's Hospital, Chengdu · CN

Funding

National Natural Science Foundation of China 81974099the 1.3.5 project for disciplines of excellence of West China Hospital, Sichuan University No.0040205301E21the Post-Doctor Research Project of West China Hospital, Sichuan University 21HXBH028
6 · The paper itself

Abstract

backgroundClear cell renal cell carcinoma (ccRCC) is the dominant subtype of kidney cancer. Dysregulation of long-chain acyl-CoA synthetase 1 (ACSL1) is strongly implicated in undesirable results in varieties of cancers. Nevertheless, the dysregulation and associated multi-omics characteristics of ACSL1 in ccRCC remain elusive.

methodsWe probed the mRNA and protein profiles of ACSL1 in RCC using data from the Cancer Genome Atlas, Gene Expression Omnibus, the Human Protein Atlas (HPA), and Clinical Proteomic Tumor Analysis Consortium (CPTAC) and verified them in our patient cohort and RCC cell lines. Correlations between ACSL1 expression and clinicopathological features, epigenetic modification and immune microenvironment characteristics were analyzed to reveal the multi-omics profile associated with ACSL1.

resultsACSL1 was down-regulated in ccRCC tissues compared to adjacent normal tissues. Lower expression of ACSL1 was linked to unfavorable pathological parameters and prognosis. The dysregulation of ACSL1 was greatly ascribed to CpG island-associated methylation modification. The ACSL1 high-expression subgroup had enriched fatty acid metabolism-related pathways and high expression of ferroptosis-related genes. In contrast, the ACSL1 low-expression subgroup exhibited higher immune and microenvironment scores, elevated expression of immune checkpoints PDCD1, CTLA4, LAG3, and TIGIT, and higher TIDE scores. Using data from the GDSC database, we corroborated that down-regulation of ACSL1 was associated with higher sensitivity towards Erlotinib, Pazopanib, and PI3K-Akt-mTOR-targeted therapeutic strategies.

conclusionTaken together, our findings point to ACSL1 as a biomarker for prognostic prediction of ccRCC, identifying the tumor microenvironment (TME) phenotype, and even contributing to treatment decision-making in ccRCC patients.

Indexed as

CarcinomaCarcinoma, Renal CellKidney NeoplasmsHumansMultiomicsPhosphatidylinositol 3-KinasesPrognosisProteomicsTumor MicroenvironmentPhosphatidylinositol 3-KinasesACSL1Clear cell renal cell carcinomaImmune Microenvironmentm6A modificationMethylation

Identifiers

PMID37608295
PMCPMC10463412
OpenAlexW4386073176

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.