Evidence map›Paper›PMID 37608044›Full record

ArticleScientific reports2023

Dysregulation of testis mRNA expression levels in hatchery-produced vs wild greater amberjack Seriola dumerili.

Anna Lavecchia, Caterina Manzari, Chrysovalentinos Pousis, Luigi Mansi, Sharon N Cox, Constantinos C Mylonas, Rosa Zupa, Claudio Lo Giudice, Caterina De Virgilio, Ernesto Picardi and 3 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Anna LavecchiaDepartment of Biosciences, Biotechnologies and Environment, University of Bari Aldo Moro, Via Orabona 4, 70124, Bari, Italy.
Caterina ManzariDepartment of Biosciences, Biotechnologies and Environment, University of Bari Aldo Moro, Via Orabona 4, 70124, Bari, Italy.
Chrysovalentinos PousisDepartment of Veterinary Medicine, University of Bari Aldo Moro, S.P. per Casamassima km.3, 70010, Valenzano, Bari, Italy.
Luigi MansiDepartment of Biosciences, Biotechnologies and Environment, University of Bari Aldo Moro, Via Orabona 4, 70124, Bari, Italy.
Sharon N CoxDepartment of Biosciences, Biotechnologies and Environment, University of Bari Aldo Moro, Via Orabona 4, 70124, Bari, Italy.
Constantinos C MylonasInstitute of Marine Biology, Biotechnology and Aquaculture, Hellenic Centre for Marine Research, 71003, Heraklion, Crete, Greece.
Rosa ZupaDepartment of Veterinary Medicine, University of Bari Aldo Moro, S.P. per Casamassima km.3, 70010, Valenzano, Bari, Italy.
Claudio Lo GiudiceDepartment of Biosciences, Biotechnologies and Environment, University of Bari Aldo Moro, Via Orabona 4, 70124, Bari, Italy.
Caterina De VirgilioDepartment of Biosciences, Biotechnologies and Environment, University of Bari Aldo Moro, Via Orabona 4, 70124, Bari, Italy.
Ernesto PicardiDepartment of Biosciences, Biotechnologies and Environment, University of Bari Aldo Moro, Via Orabona 4, 70124, Bari, Italy.
Gianluca VentrigliaDepartment of Veterinary Medicine, University of Bari Aldo Moro, S.P. per Casamassima km.3, 70010, Valenzano, Bari, Italy.
Graziano PesoleDepartment of Biosciences, Biotechnologies and Environment, University of Bari Aldo Moro, Via Orabona 4, 70124, Bari, Italy.
Aldo CorrieroDepartment of Veterinary Medicine, University of Bari Aldo Moro, S.P. per Casamassima km.3, 70010, Valenzano, Bari, Italy. aldo.corriero@uniba.it.
University of Bari Aldo Moro · ITHellenic Centre for Marine Research · GRInstitute of Biomembranes, Bioenergetics and Molecular Biotechnologies · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Reproductive dysfunctions have been recently documented in male greater amberjack Seriola dumerili caught from the wild and reared in captivity. In the present study, we compared testis transcriptome in wild fish (WILD), hatchery-produced fish with apparently normal spermatogenesis (Normal Farmed; NormalF) and hatchery-produced fish with evident reproductive dysfunction (Dysfunctional Farmed; DysF). Gene expression analysis identified 2157, 1985 and 74 differentially expressed genes (DEGs) in DysF vs WILD, NormalF vs DysF and NormalF vs WILD comparisons, respectively. In DysF, a dysregulation of several interconnected biological processes, including cell assembly, steroidogenesis and apoptosis was found. Gene enrichment of progesterone-mediated oocyte maturation, oocyte meiosis and cell cycle pathways were identified in the DysF vs NormalF comparison. Most of the DEGs involved in the enriched pathways were downregulated in DysF. The comparison of NormalF vs WILD showed that most of the DEGs were downregulated in NormalF, including a gene that encodes for a regulatory protein with a protective role in apoptosis regulation (ptpn6), indicating that spermatogenesis was dysfunctional also in the apparently "normal" hatchery-produced fish. Hence, rearing of male greater amberjack in captivity, from eggs produced by captive breeders, did not prevent the appearance of reproductive dysfunctions, and these dysfunctions involved several biological processes and metabolic pathways.

Indexed as

PerciformesTestisAnimalsMaleMeiosisRNA, MessengerSpermatogenesisRNA, Messenger

Identifiers

PMID37608044
PMCPMC10444852
OpenAlexW4386082908

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.