Evidence map›Paper›PMID 37608037›Full record

ArticlePlanta2023

Genome-wide identification and functional characterization of borneol dehydrogenases in Wurfbainia villosa.

Xiaojing Lin, Linxuan Huang, Huilin Liang, Chen Hou, Xuli Ling, Yuanxia Chen, Peng Yang, Qingwen Wu, Haiying Zhao, Sirong Wu and 3 more

Abstract read
PubMed Publisher
In one paragraph

Article in Planta, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Genome-Wide Analysis and Characterization of theInternational journal of molecular sciences · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Xiaojing LinSchool of Pharmaceutical Science, Guangzhou University of Chinese Medicine, Guangzhou, 510006, People's Republic of China.
Linxuan HuangSchool of Pharmaceutical Science, Guangzhou University of Chinese Medicine, Guangzhou, 510006, People's Republic of China.
Huilin LiangSchool of Pharmaceutical Science, Guangzhou University of Chinese Medicine, Guangzhou, 510006, People's Republic of China.
Chen HouGuangdong Provincial Key Laboratory of Silviculture, Protection and Utilization, Guangdong Academy of Forestry, Guangzhou, 510006, People's Republic of China.
Xuli LingSchool of Pharmaceutical Science, Guangzhou University of Chinese Medicine, Guangzhou, 510006, People's Republic of China.
Yuanxia ChenSchool of Pharmaceutical Science, Guangzhou University of Chinese Medicine, Guangzhou, 510006, People's Republic of China.
Peng YangSchool of Pharmaceutical Science, Guangzhou University of Chinese Medicine, Guangzhou, 510006, People's Republic of China.
Qingwen WuSchool of Pharmaceutical Science, Guangzhou University of Chinese Medicine, Guangzhou, 510006, People's Republic of China.
Haiying ZhaoKey Laboratory of Chinese Medicinal Resource from Lingnan (Ministry of Education), Guangzhou University of Chinese Medicine, Guangzhou, 510006, People's Republic of China.
Sirong WuSchool of Pharmaceutical Science, Guangzhou University of Chinese Medicine, Guangzhou, 510006, People's Republic of China.
Ruoting ZhanSchool of Pharmaceutical Science, Guangzhou University of Chinese Medicine, Guangzhou, 510006, People's Republic of China.
Dongming MaSchool of Pharmaceutical Science, Guangzhou University of Chinese Medicine, Guangzhou, 510006, People's Republic of China. madm@gzucm.edu.cn.ORCID http://orcid.org/0000-0003-4612-0756
Jinfen YangSchool of Pharmaceutical Science, Guangzhou University of Chinese Medicine, Guangzhou, 510006, People's Republic of China. yangjf@gzucm.edu.cn.
Guangzhou University of Chinese Medicine · CNGuangdong Academy of Forestry · CN

Funding

National Natural Science Foundation of China 81303163
6 · The paper itself

Abstract

MAIN

conclusionGenome-wide screening of short-chain dehydrogenases/reductases (SDR) family reveals functional diversification of borneol dehydrogenase (BDH) in Wurfbainia villosa. Wurfbainia villosa is an important medicinal plant, the fruits of which accumulate abundant terpenoids, especially bornane-type including borneol and camphor. The borneol dehydrogenase (BDH) responsible for the conversion of borneol to camphor in W. villosa remains unknown. BDH is one member of short-chain dehydrogenases/reductases (SDR) family. Here, a total of 115 classical WvSDR genes were identified through genome-wide screening. These WvSDRs were unevenly distributed on different chromosomes. Seven candidate WvBDHs based on phylogenetic analysis and expression levels were selected for cloning. Of them, four BDHs can catalyze different configurations of borneol and other monoterpene alcohol substrates to generate the corresponding oxidized products. WvBDH1 and WvBDH2, preferred (+)-borneol to (-)-borneol, producing the predominant ( +)-camphor. WvBDH3 yielded approximate equivalent amount of (+)-camphor and (-)-camphor, in contrast, WvBDH4 generated exclusively (+)-camphor. The metabolic profiles of the seeds showed that the borneol and camphor present were in the dextrorotatory configuration. Enzyme kinetics and expression pattern in different tissues suggested WvBDH2 might be involved in the biosynthesis of camphor in W. villosa. All results will increase the understanding of functional diversity of BDHs.

Indexed as

Alcohol OxidoreductasesCamphorCamphanesPhylogenyAlcohol Oxidoreductasesborneol dehydrogenaseCamphanesCamphorisoborneolBorneol dehydrogenasesCamphorSDR110C familySDR classical familyWurfbainia villosa (Amomum villosum)

Identifiers

PMID37608037
OpenAlexW4386047921

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.