Evidence map›Paper›PMID 37606790›Full record

ReviewApplied microbiology and biotechnology2023

Insights into Taxol® biosynthesis by endophytic fungi.

Kamalraj Subban, Frank Kempken

Open access · hybridAbstract readReview
In one paragraph

Review in Applied microbiology and biotechnology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
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  10. Cinnabar-induced hormesis inFrontiers in microbiology · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Kamalraj SubbanDepartment of Genetics & Molecular Biology in Botany, Botanical Institute and Botanical Garden, Christian-Albrecht University of Kiel, Olshausenstraße 40, 24098, Kiel, Germany.ORCID http://orcid.org/0000-0003-2720-0697
Frank KempkenDepartment of Genetics & Molecular Biology in Botany, Botanical Institute and Botanical Garden, Christian-Albrecht University of Kiel, Olshausenstraße 40, 24098, Kiel, Germany. fkempken@bot.uni-kiel.de.ORCID http://orcid.org/0000-0002-7853-8009
Christian-Albrechts-Universität zu Kiel · DE

Funding

HORIZON EUROPE Marie Sklodowska-Curie Actions 101031370
6 · The paper itself

Abstract

There have been two hundred reports that endophytic fungi produce Taxol®, but its production yield is often rather low. Although considerable efforts have been made to increase Taxol/taxanes production in fungi by manipulating cocultures, mutagenesis, genome shuffles, and gene overexpression, little is known about the molecular signatures of Taxol biosynthesis and its regulation. It is known that some fungi have orthologs of the Taxol biosynthetic pathway, but the overall architecture of this pathway is unknown. A biosynthetic putative gene homology approach, combined with genomics and transcriptomics analysis, revealed that a few genes for metabolite residues may be located on dispensable chromosomes. This review explores a number of crucial topics (i) finding biosynthetic pathway genes using precursors, elicitors, and inhibitors; (ii) orthologs of the Taxol biosynthetic pathway for rate-limiting genes/enzymes; and (iii) genomics and transcriptomics can be used to accurately predict biosynthetic putative genes and regulators. This provides promising targets for future genetic engineering approaches to produce fungal Taxol and precursors. KEY POINTS: • A recent trend in predicting Taxol biosynthetic pathway from endophytic fungi. • Understanding the Taxol biosynthetic pathway and related enzymes in fungi. • The genetic evidence and formation of taxane from endophytic fungi.

Indexed as

PaclitaxelTaxusFungiPaclitaxelEndophytic fungiFungal Taxol biosynthesisOrthologous genesTaxol®Taxol biosynthetic pathwaysUnigenes

Identifiers

PMID37606790
PMCPMC10560151
OpenAlexW4386046508

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.