Evidence map›Paper›PMID 37605497›Full record

ArticleJournal of Korean medical science2023

Epigenetic Regulation of the Expression of T Cell Stimulatory and Inhibitory Factors by Histone H3 Lysine Modification Enzymes and Its Prognostic Roles in Glioblastoma.

Sang Hyuk Lee, Seung Hwan Kim, Taek Min Nam, Ji Hwan Jang, Kyu Hong Kim, Young-Sam Lee, Minseok S Kim, Mee-Seon Kim, Sung Yup Jin, Moonok Lee and 2 more

Open access · goldAbstract read
In one paragraph

Article in Journal of Korean medical science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Sang Hyuk LeeDepartment of Neurosurgery, Samsung Changwon Hospital, Sungkyunkwan University School of Medicine, Changwon, Korea.ORCID https://orcid.org/0000-0003-4225-5485
Seung Hwan KimDepartment of Neurosurgery, Samsung Changwon Hospital, Sungkyunkwan University School of Medicine, Changwon, Korea.ORCID https://orcid.org/0000-0002-5898-6517
Taek Min NamDepartment of Neurosurgery, Samsung Changwon Hospital, Sungkyunkwan University School of Medicine, Changwon, Korea.ORCID https://orcid.org/0000-0002-9596-4659
Ji Hwan JangDepartment of Neurosurgery, Samsung Changwon Hospital, Sungkyunkwan University School of Medicine, Changwon, Korea.ORCID https://orcid.org/0000-0001-6364-3992
Kyu Hong KimDepartment of Neurosurgery, Samsung Changwon Hospital, Sungkyunkwan University School of Medicine, Changwon, Korea.ORCID https://orcid.org/0000-0002-5027-4881
Young-Sam LeeDepartment of New Biology, Daegu Gyeongbuk Institute of Science and Technology, Daegu, Korea.ORCID https://orcid.org/0000-0002-4702-0127
Minseok S KimDepartment of New Biology, Daegu Gyeongbuk Institute of Science and Technology, Daegu, Korea.ORCID https://orcid.org/0000-0002-4268-6886
Mee-Seon KimDepartment of Pathology, School of Dentistry, Kyungpook National University, Kyungpook National University Hospital, Daegu, Korea.ORCID https://orcid.org/0000-0002-4244-1985
Sung Yup JinDepartment of Anesthesiology and Pain Medicine, Samsung Changwon Hospital, Sungkyunkwan University School of Medicine, Changwon, Korea.ORCID https://orcid.org/0000-0002-9925-2296
Moonok LeeDepartment of Anesthesiology and Pain Medicine, Samsung Changwon Hospital, Sungkyunkwan University School of Medicine, Changwon, Korea.ORCID https://orcid.org/0000-0001-7050-9134
Sung-Hun LeeCancer Research Institute, Clinomics Inc., Suwon, Korea.ORCID https://orcid.org/0000-0002-2172-7888
Young Zoon KimDepartment of Neurosurgery, Samsung Changwon Hospital, Sungkyunkwan University School of Medicine, Changwon, Korea. yzkim@skku.edu.ORCID https://orcid.org/0000-0003-1171-0780
Samsung (South Korea) · KRDaegu Gyeongbuk Institute of Science and Technology · KR

Funding

National Research Foundation of Korea NRF 2019R 1F1A 1054681Samsung Changwon HospitalSungkyunkwan University
6 · The paper itself

Abstract

backgroundThis study aimed to identify the specific T cell co-stimulatory and co-inhibitory factors that play prognostic roles in patients with glioblastoma. Additionally, the unique histone H3 modification enzymes that regulate the expression levels of these specific co-stimulatory and co-inhibitory factors were investigated.

methodsThe medical records of 84 patients newly diagnosed with glioblastoma at our institution from January 2006 to December 2020 were retrospectively reviewed. Immunohistochemical (IHC) staining for T cell co-stimulatory factors (CD27, CD28, CD137, OX40, and ICOS), T cell co-inhibitory factors (CTLA4, PD1, PD-L1, TIM3, and CD200R), and histone H3 lysine modification enzymes (MLL4, RIZ, EZH1, NSD2, KDM5c, JMJD1a, UTX, and JMJD5) was performed on archived paraffin-embedded tissues obtained by biopsy or resection. Quantitative real time-polymerase chain reaction (qRT-PCR) was performed for specific factors, which demonstrated causal relationships, in order to validate the findings of the IHC examinations.

resultsThe mean follow-up duration was 27.5 months (range, 4.1-43.5 months). During this period, 76 patients (90.5%) died, and the mean OS was 19.4 months (95% confidence interval, 16.3-20.9 months). Linear positive correlations were observed between the expression levels of CD28 and JMJD1a (R2 linear = 0.982) and those of CD137 and UTX (R2 linear = 1.528). Alternatively, significant negative correlations were observed between the expression levels of CTLA4 and RIZ (R2 linear = -1.746) and those of PD-L1 and EZH1 (R2 linear = -2.118); these relationships were confirmed by qRT-PCR. In the multivariate analysis, increased expression levels of CD28 (

conclusionThese findings suggest that the expression of certain T cell co-stimulatory factors, such as CD28 and CD 137, and co-inhibitory factors, such as CTLA4 and PD-L1 are associated with prognosis of glioblastoma patients.

Indexed as

GlioblastomaHistonesB7-H1 AntigenCD28 AntigensCTLA-4 AntigenEpigenesis, GeneticHumansLysinePrognosisRetrospective StudiesT-LymphocytesB7-H1 AntigenCD28 AntigensCTLA-4 AntigenHistonesLysineEpigenomeGlioblastomaHistone ModificationImmunologyOncologyT Cell

Identifiers

PMID37605497
PMCPMC10442499
OpenAlexW4385711447

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.